Best Alignments for T0270

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1q8bA/T0270-1q8bA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1q8bA/T0270-1q8bA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.7748e+005.4618e+00 unknown_sccs
1ap8/T0270-1ap8-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ap8/T0270-1ap8-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.5125e+002.9033e+00 1ap8 d.86.1.1
1qjhA/1ris-T0270-fssp-local-adpstyle5.a2m 1qjhA/1ris-T0270-fssp-local-adpstyle5.al 8.5522e+002.7593e+00 1ris d.58.14.1
1mbqA/T0270-1mbqA-t04-global-adpstyle1.a2m 1mbqA/T0270-1mbqA-t04-global-adpstyle1.al 1.7185e+014.9980e+00 b.47.1.2
1i11A/1hryA-T0270-fssp-local-adpstyle5.a2m 1i11A/1hryA-T0270-fssp-local-adpstyle5.al 1.7388e+016.4554e+00 1hryA a.21.1.1
1p6gF/T0270-1p6gF-t2k-local-adpstyle5.a2m 1p6gF/T0270-1p6gF-t2k-local-adpstyle5.al 1.9314e+011.9159e+01 i.1.1.1
1w1kA/T0270-1w1kA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1w1kA/T0270-1w1kA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.1573e+013.6192e-01
1souA/T0270-1souA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1souA/T0270-1souA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.1685e+012.0720e+00
1rhjA/T0270-1rhjA-t2k-global-adpstyle1.a2m 1rhjA/T0270-1rhjA-t2k-global-adpstyle1.al 2.3013e+017.8041e+00 c.17.1.1
1fc0A/1a8i-T0270-fssp-local-adpstyle5.a2m 1fc0A/1a8i-T0270-fssp-local-adpstyle5.al 2.3537e+018.7294e+00 1a8i c.87.1.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001