# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
4dpvZ	584	1.28e+01	2cas	b.121.5.2	23377
1v8gA	329	1.39e+01		a.46.2.1	-953
				c.27.1.1	-6644
1ut8A	291	1.41e+01		a.60.7.1	-1036
				c.120.1.2	-6675
1ile	821	1.43e+01	1ile	a.27.1.1	16924
				b.51.1.1	26889
				c.26.1.1	31591
1uu1A	335	1.55e+01		c.67.1.1	-8146
1evfA	264	1.58e+01	1bkpA	d.117.1.1	40932
1semA	58	1.62e+01	1ckaA	b.34.2.1	24544
1qqqA	264	1.64e+01	1bkpA	d.117.1.1	40931
1rw7A	243	1.91e+01		c.23.16.2	-6530
1ootA	60	1.91e+01		b.34.2.1	-3576
1rkuA	206	2.01e+01		unknown_sccs	-6823
1souA	194	2.02e+01			
1ftrA	296	2.31e+01	1ftrA	d.58.33.1	39485
				d.58.33.1	39486
1a0jA	223	2.38e+01	5ptp	b.47.1.2	26002
1hvyA	288	2.77e+01	1bkpA	d.117.1.1	41049
1o17A	345	2.92e+01		a.46.2.1	80765
				c.27.1.1	80766
1qlpA	394	3.04e+01	1ovaA	e.1.1.1	42628
1p0yA	444	3.25e+01		a.166.1.1	87654
				b.85.7.3	87655
1poiA	317	3.68e+01	1poiA	unknown_sccs	34153
1n82A	331	3.79e+01		c.1.8.3	-5306
1qwgA	251	3.81e+01		unknown_sccs	-5678