Best Alignments for T0269

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1qmvA/T0269-1qmvA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1qmvA/T0269-1qmvA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.7530e-354.3084e-51 1qq2A c.47.1.10
1prxA/T0269-1prxA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1prxA/T0269-1prxA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.6950e-312.9490e-46 1prxA c.47.1.10
1n8jA/T0269-1n8jA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1n8jA/T0269-1n8jA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.5273e-267.4560e-39 c.47.1.10
1hd2A/T0269-1hd2A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hd2A/T0269-1hd2A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.8501e-222.8749e-30 c.47.1.10
1psqA/T0269-1psqA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1psqA/T0269-1psqA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.4898e-211.8582e-29 c.47.1.10
1st9A/T0269-1st9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1st9A/T0269-1st9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.4361e-184.5328e-28 c.47.1.10
1q98A/T0269-1q98A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1q98A/T0269-1q98A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.9005e-165.1505e-37 c.47.1.10
1qxhA/T0269-1qxhA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1qxhA/T0269-1qxhA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.9995e-163.4120e-34 c.47.1.10
1kygA/T0269-1kygA-t2k-global-adpstyle1.a2m 1kygA/T0269-1kygA-t2k-global-adpstyle1.al 7.6710e-161.2506e-23 c.47.1.10
1jfuA/T0269-1jfuA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1jfuA/T0269-1jfuA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.3416e-113.9201e-32 c.47.1.10
1lu4A/T0269-1lu4A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1lu4A/T0269-1lu4A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.0271e-105.0172e-28 c.47.1.10
1kngA/T0269-1kngA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1kngA/T0269-1kngA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.7666e-091.4137e-26 c.47.1.10
1gp1A/T0269-1gp1A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1gp1A/T0269-1gp1A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.7572e-021.5314e-23 1gp1A c.47.1.10

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001