Best Alignments for T0268

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1m6yA/T0268-1m6yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1m6yA/T0268-1m6yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.6222e-432.4283e-62 a.60.13.1
c.66.1.23
1ixkA/T0268-1ixkA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ixkA/T0268-1ixkA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.8732e-072.1157e-11 unknown_sccs
1l3iA/T0268-1l3iA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1l3iA/T0268-1l3iA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.9247e-078.0900e-12 c.66.1.22
1sqgA/T0268-1sqgA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1sqgA/T0268-1sqgA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3318e-051.3908e-08
1o54A/T0268-1o54A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1o54A/T0268-1o54A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.3028e-056.5807e-08 c.66.1.13
1dusA/T0268-1dusA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dusA/T0268-1dusA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0781e-042.8578e-08 1dusA c.66.1.4
1d2gA/T0268-1d2gA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1d2gA/T0268-1d2gA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.5777e-044.7584e-08 1xvaA c.66.1.5
1i9gA/T0268-1i9gA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1i9gA/T0268-1i9gA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.9390e-044.8833e-08 c.66.1.13
1ej0A/T0268-1ej0A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ej0A/T0268-1ej0A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.5240e-042.2473e-08 1ej0A c.66.1.2
1g38A/T0268-1g38A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1g38A/T0268-1g38A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.3721e-043.5826e-07 2admA c.66.1.27
1ufkA/T0268-1ufkA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ufkA/T0268-1ufkA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3666e-031.4268e-07 unknown_sccs
1dl5A/T0268-1dl5A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dl5A/T0268-1dl5A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.4073e-038.4870e-07 1dl5A d.197.1.1
c.66.1.7
1g6q2/T0268-1g6q2-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1g6q2/T0268-1g6q2-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.6508e-031.1056e-16 1g6q2
1qzzA/T0268-1qzzA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1qzzA/T0268-1qzzA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.8476e-035.4823e-08 a.4.5.29
c.66.1.12
1f3lA/T0268-1f3lA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1f3lA/T0268-1f3lA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 4.6249e-031.0341e-16 1g6q2 c.66.1.6
1jg1A/T0268-1jg1A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1jg1A/T0268-1jg1A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.3458e-031.3869e-10 c.66.1.7
1kpgA/T0268-1kpgA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1kpgA/T0268-1kpgA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.0749e-027.5197e-20 c.66.1.18
1i1nA/T0268-1i1nA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1i1nA/T0268-1i1nA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.3970e-022.7188e-13 c.66.1.7
1kr5A/T0268-1kr5A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1kr5A/T0268-1kr5A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.8399e-023.8397e-13 c.66.1.7
1l1eA/T0268-1l1eA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1l1eA/T0268-1l1eA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.9438e-023.4987e-20 c.66.1.18

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001