Mon Aug  9 15:40:33 PDT 2004
T0268

DUE 29 Aug 2004


Tue Aug 10 01:25:34 PDT 2004 Kevin Karplus

comparative model with 1m6yA (c.66.1.23) as best template.
The c.2.1.2 fold also seems to get a lot of good hits.

Once again, the rr constraints look good, but unneeded.


Tue Aug 10 17:36:54 PDT 2004 Kevin Karplus

With the unconstrained try3 costfcn, try3-opt2 scores best.
Rosetta likes try1-opt2.repack-nonPC best.

I'll submit
	try3-opt2
	try3-opt2.repack-nonPC
	try1-opt2
	try1-opt2.repack-nonPC
	T0268-1m6yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5
	
Thu Nov 18 23:50:19 PST 2004	Martina Koeva

Based on the smooth gdt scores:

best sam-t04	74.6526 (also align1, which is model5)
best submit	74.3719 (model 5)
model1		66.8415
auto		71.6122
align		74.6526
robetta best	72.5888 (robetta model1)
robetta1	72.5888