Best Alignments for T0265

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1lj9A/T0265-1lj9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lj9A/T0265-1lj9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.7521e-161.0749e-20 a.4.5.28
1jgsA/T0265-1jgsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jgsA/T0265-1jgsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.2491e-155.8691e-19 a.4.5.28
1lnwA/T0265-1lnwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lnwA/T0265-1lnwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0757e-141.6780e-18 a.4.5.28
1s3jA/T0265-1s3jA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1s3jA/T0265-1s3jA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3591e-145.8337e-19 a.4.5.28
1r1uA/T0265-1r1uA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1r1uA/T0265-1r1uA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.8466e-103.3543e-13
1r1tA/T0265-1r1tA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1r1tA/T0265-1r1tA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.8403e-105.1639e-13
1q1hA/T0265-1q1hA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1q1hA/T0265-1q1hA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.2348e-102.9969e-13 unknown_sccs
1smtB/T0265-1smtB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1smtB/T0265-1smtB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.3429e-105.3745e-13 1smtA a.4.5.5
1ub9A/T0265-1ub9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ub9A/T0265-1ub9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.8008e-101.4671e-12 a.4.5.28
1p4xA/T0265-1p4xA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1p4xA/T0265-1p4xA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.5023e-092.3317e-11 a.4.5.28
1i1gA/T0265-1i1gA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1i1gA/T0265-1i1gA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.9160e-083.1507e-13 a.4.5.32
d.58.4.2
1okrA/T0265-1okrA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1okrA/T0265-1okrA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.2736e-084.5595e-14 unknown_sccs
1on2A/T0265-1on2A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1on2A/T0265-1on2A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.3152e-082.6319e-14 a.4.5.24
a.76.1.1
1mkmA/T0265-1mkmA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1mkmA/T0265-1mkmA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 8.0369e-085.2479e-14 a.4.5.33
d.110.2.2
1j5yA/T0265-1j5yA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1j5yA/T0265-1j5yA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 9.1368e-062.7041e-14 d.94.2.1
a.4.5.1
1ft9A/T0265-1ft9A-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1ft9A/T0265-1ft9A-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.0655e-055.3461e-11 1ft9A a.4.5.4
b.82.3.1
1ddnA/T0265-1ddnA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1ddnA/T0265-1ddnA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.5813e-052.3328e-13 1bi0 a.4.5.24
a.76.1.1
1tbxA/T0265-1tbxA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1tbxA/T0265-1tbxA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.9537e-053.3971e-13
1bia/T0265-1bia-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1bia/T0265-1bia-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.5367e-057.8395e-12 1bia b.34.1.1
d.104.1.2
a.4.5.1
1bi0/T0265-1bi0-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1bi0/T0265-1bi0-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.7220e-053.7564e-12 1bi0 a.4.5.24
b.34.1.2
a.76.1.1
2dtr/T0265-2dtr-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2dtr/T0265-2dtr-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.6760e-051.0614e-11 1bi0 a.4.5.24
b.34.1.2
a.76.1.1
1mzbA/T0265-1mzbA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1mzbA/T0265-1mzbA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.6929e-055.1543e-14 unknown_sccs
1bib/T0265-1bib-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1bib/T0265-1bib-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 4.5218e-053.2212e-12 1bia b.34.1.1
d.104.1.2
a.4.5.1
1qzzA/T0265-1qzzA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1qzzA/T0265-1qzzA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.1797e-044.7505e-12 a.4.5.29
c.66.1.12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001