Best Alignments for T0264

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1pjqA/T0264-1pjqA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pjqA/T0264-1pjqA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3678e-253.2027e-39 c.90.1.1
c.2.1.11
e.37.1.1
1cbf/T0264-1cbf-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1cbf/T0264-1cbf-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.8634e-252.5460e-38 1cbf c.90.1.1
1pjtA/T0264-1pjtA-t2k-local-adpstyle5.a2m 1pjtA/T0264-1pjtA-t2k-local-adpstyle5.al 1.8428e-245.6679e-33 c.90.1.1
c.2.1.11
e.37.1.1
1vhvA/T0264-1vhvA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1vhvA/T0264-1vhvA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.0840e-236.7365e-34 c.90.1.1
4pfk/T0264-4pfk-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4pfk/T0264-4pfk-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.1782e-019.1586e-04 3pfk c.89.1.1
1oi7A/T0264-1oi7A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1oi7A/T0264-1oi7A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.3995e-015.0035e-03 c.2.1.8
c.23.4.1
1fsz/T0264-1fsz-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fsz/T0264-1fsz-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0376e+001.9930e-02 1fsz c.32.1.1
d.79.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001