Best Alignments for T0262

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1top/T0262-1top-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1top/T0262-1top-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.3405e-021.3917e-02 1ncx a.39.1.5
1s29A/T0262-1s29A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1s29A/T0262-1s29A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.9953e-011.7108e-02 unknown_sccs
1ggzA/T0262-1ggzA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ggzA/T0262-1ggzA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.6494e-011.3535e-01 a.39.1.5
1la0A/T0262-1la0A-t2k-local-adpstyle1.a2m 1la0A/T0262-1la0A-t2k-local-adpstyle1.al 3.1928e+001.8679e+00 a.39.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001