Best Alignments for T0262

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1top/T0262-1top-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1top/T0262-1top-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0156e-011.5631e-02 1ncx a.39.1.5
1s29A/T0262-1s29A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1s29A/T0262-1s29A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.8489e-012.1645e-02 unknown_sccs
2sas/T0262-2sas-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2sas/T0262-2sas-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1327e+003.0127e-01 2sas a.39.1.5
1ih0A/T0262-1ih0A-t2k-global-adpstyle1.a2m 1ih0A/T0262-1ih0A-t2k-global-adpstyle1.al 1.2013e+007.1454e-01 a.39.1.5
1ozsA/T0262-1ozsA-t2k-global-adpstyle1.a2m 1ozsA/T0262-1ozsA-t2k-global-adpstyle1.al 1.2258e+007.1799e-01 a.39.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001