Best Alignments for T0262

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1r7lA/T0262-1r7lA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.2709e+014.8159e-03
1r7lA/T0262-1r7lA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.2709e+016.2364e-03
1r7lA/T0262-1r7lA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.2709e+013.6337e-02
1r7lA/T0262-1r7lA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.2709e+017.5754e-02
1dl0A/T0262-1dl0A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.4873e+011.6376e-01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.4873e+012.2546e-01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.4873e+012.2603e-01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.4873e+012.4963e-01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-t04-global-str2-1.5-adpstyle5.a2m 4.4873e+018.3478e-01 1dl0A g.3.6.2
1r7lA/T0262-1r7lA-t04-global-str2-1.5-adpstyle5.a2m 4.2709e+011.9617e+00
1dl0A/T0262-1dl0A-t2k-global-str2-1.5-adpstyle5.a2m 4.4873e+011.9625e+00 1dl0A g.3.6.2
1r7lA/T0262-1r7lA-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.2709e+014.0356e+00
1dl0A/T0262-1dl0A-t2k-local-str2-1.5-adpstyle5.a2m 4.4873e+014.4040e+00 1dl0A g.3.6.2
1r7lA/T0262-1r7lA-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.2709e+014.4655e+00
1autL/1hcgB-T0262-fssp-global-adpstyle5.a2m 2.6146e+015.1551e+00 1hcgB g.3.11.1
1dl0A/T0262-1dl0A-t04-local-str2-1.5-adpstyle5.a2m 4.4873e+015.2719e+00 1dl0A g.3.6.2
1dl0A/1dl0A-T0262-fssp-global-adpstyle5.a2m 4.4873e+015.3467e+00 1dl0A g.3.6.2
1r7lA/T0262-1r7lA-t2k-global-str2-1.5-adpstyle5.a2m 4.2709e+016.0786e+00
1r7lA/T0262-1r7lA-t04-local-str2-1.5-adpstyle5.a2m 4.2709e+016.6652e+00
1autL/1hcgB-T0262-fssp-local-adpstyle5.a2m 2.6146e+017.8680e+00 1hcgB g.3.11.1
1fr8A/1fgxA-T0262-fssp-local-adpstyle5.a2m 3.2033e+011.0008e+01 1fgxA c.68.1.2
1dl0A/1dl0A-T0262-fssp-local-adpstyle5.a2m 4.4873e+011.1215e+01 1dl0A g.3.6.2
1fr8A/1fgxA-T0262-fssp-global-adpstyle5.a2m 3.2033e+011.1230e+01 1fgxA c.68.1.2
1n9wA/T0262-1n9wA-t2k-global-adpstyle1.a2m 1.6095e+011.1712e+01 b.40.4.1
d.104.1.1
1n9wA/T0262-1n9wA-t2k-global-adpstyle5.a2m 1.6095e+011.1712e+01 b.40.4.1
d.104.1.1
1n9wA/T0262-1n9wA-t04-global-adpstyle5.a2m 1.6095e+011.2117e+01 b.40.4.1
d.104.1.1
1n9wA/T0262-1n9wA-t04-global-adpstyle1.a2m 1.6095e+011.2117e+01 b.40.4.1
d.104.1.1
1d2jA/1ajj-T0262-fssp-local-adpstyle5.a2m 5.4066e+011.3691e+01 1ajj g.12.1.1
1r7lA/T0262-1r7lA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.2709e+011.4644e+01
1dj2A/1adeA-T0262-fssp-local-adpstyle5.a2m 5.1510e+011.5142e+01 1adeA c.37.1.10
1n9wA/T0262-1n9wA-simplesw-adpstyle1.a2m 1.6095e+011.5960e+01 b.40.4.1
d.104.1.1
1n9wA/T0262-1n9wA-simplesw-adpstyle5.a2m 1.6095e+011.5960e+01 b.40.4.1
d.104.1.1
1r7lA/T0262-1r7lA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.2709e+011.6461e+01
1dj2A/1adeA-T0262-fssp-global-adpstyle5.a2m 5.1510e+011.6775e+01 1adeA c.37.1.10
1n9wA/T0262-1n9wA-t04-local-adpstyle5.a2m 1.6095e+011.6878e+01 b.40.4.1
d.104.1.1
1n9wA/T0262-1n9wA-t04-local-adpstyle1.a2m 1.6095e+011.6878e+01 b.40.4.1
d.104.1.1
1n9wA/T0262-1n9wA-t2k-local-adpstyle5.a2m 1.6095e+011.7378e+01 b.40.4.1
d.104.1.1
1n9wA/T0262-1n9wA-t2k-local-adpstyle1.a2m 1.6095e+011.7378e+01 b.40.4.1
d.104.1.1
1d2jA/1ajj-T0262-fssp-global-adpstyle5.a2m 5.4066e+011.7436e+01 1ajj g.12.1.1
1dl0A/T0262-1dl0A-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.4873e+011.8127e+01 1dl0A g.3.6.2
1lqsL/T0262-1lqsL-t2k-global-adpstyle1.a2m 4.5197e+012.2173e+01 a.26.1.3
1lqsL/T0262-1lqsL-t2k-global-adpstyle5.a2m 4.5197e+012.2173e+01 a.26.1.3
1h7oA/T0262-1h7oA-t04-global-adpstyle1.a2m 2.2908e+012.2244e+01 c.1.10.3
1h7oA/T0262-1h7oA-t04-global-adpstyle5.a2m 2.2908e+012.2244e+01 c.1.10.3
1dl0A/T0262-1dl0A-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.4873e+012.4112e+01 1dl0A g.3.6.2
1h7oA/T0262-1h7oA-t04-local-adpstyle1.a2m 2.2908e+012.5096e+01 c.1.10.3
1h7oA/T0262-1h7oA-t04-local-adpstyle5.a2m 2.2908e+012.5096e+01 c.1.10.3
1h7oA/T0262-1h7oA-t2k-local-adpstyle5.a2m 2.2908e+012.5423e+01 c.1.10.3
1h7oA/T0262-1h7oA-t2k-local-adpstyle1.a2m 2.2908e+012.5423e+01 c.1.10.3
1lqsL/T0262-1lqsL-t04-global-adpstyle1.a2m 4.5197e+012.5817e+01 a.26.1.3
1lqsL/T0262-1lqsL-t04-global-adpstyle5.a2m 4.5197e+012.5817e+01 a.26.1.3
1h7oA/T0262-1h7oA-simplesw-adpstyle5.a2m 2.2908e+012.6082e+01 c.1.10.3
1h7oA/T0262-1h7oA-simplesw-adpstyle1.a2m 2.2908e+012.6082e+01 c.1.10.3
1r7lA/T0262-1r7lA-t2k-local-str2-1.5-adpstyle5.a2m 4.2709e+012.6856e+01
1autL/T0262-1autL-t04-local-adpstyle5.a2m 2.6146e+012.8962e+01 1hcgB g.3.11.1
1autL/T0262-1autL-t04-local-adpstyle1.a2m 2.6146e+012.8962e+01 1hcgB g.3.11.1
1autL/T0262-1autL-t2k-local-adpstyle1.a2m 2.6146e+012.9292e+01 1hcgB g.3.11.1
1autL/T0262-1autL-t2k-local-adpstyle5.a2m 2.6146e+012.9292e+01 1hcgB g.3.11.1
1autL/T0262-1autL-simplesw-adpstyle1.a2m 2.6146e+012.9377e+01 1hcgB g.3.11.1
1autL/T0262-1autL-simplesw-adpstyle5.a2m 2.6146e+012.9377e+01 1hcgB g.3.11.1
1p22B/T0262-1p22B-t04-global-adpstyle5.a2m 5.3605e+012.9824e+01 a.157.1.1
d.42.1.1
1p22B/T0262-1p22B-t04-global-adpstyle1.a2m 5.3605e+012.9824e+01 a.157.1.1
d.42.1.1
1dl0A/T0262-1dl0A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.4873e+013.1231e+01 1dl0A g.3.6.2
1h7oA/T0262-1h7oA-t2k-global-adpstyle5.a2m 2.2908e+013.2418e+01 c.1.10.3
1h7oA/T0262-1h7oA-t2k-global-adpstyle1.a2m 2.2908e+013.2418e+01 c.1.10.3
1fr8A/T0262-1fr8A-simplesw-adpstyle5.a2m 3.2033e+013.2797e+01 1fgxA c.68.1.2
1fr8A/T0262-1fr8A-simplesw-adpstyle1.a2m 3.2033e+013.2797e+01 1fgxA c.68.1.2
1p22B/T0262-1p22B-t2k-global-adpstyle5.a2m 5.3605e+013.3371e+01 a.157.1.1
d.42.1.1
1p22B/T0262-1p22B-t2k-global-adpstyle1.a2m 5.3605e+013.3371e+01 a.157.1.1
d.42.1.1
1dl0A/T0262-1dl0A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.4873e+013.4673e+01 1dl0A g.3.6.2
1fr8A/T0262-1fr8A-t2k-local-adpstyle1.a2m 3.2033e+013.6403e+01 1fgxA c.68.1.2
1fr8A/T0262-1fr8A-t2k-local-adpstyle5.a2m 3.2033e+013.6403e+01 1fgxA c.68.1.2
1fr8A/T0262-1fr8A-t04-local-adpstyle5.a2m 3.2033e+013.7519e+01 1fgxA c.68.1.2
1fr8A/T0262-1fr8A-t04-local-adpstyle1.a2m 3.2033e+013.7519e+01 1fgxA c.68.1.2
1dj2A/T0262-1dj2A-t04-global-adpstyle1.a2m 5.1510e+014.1506e+01 1adeA c.37.1.10
1dj2A/T0262-1dj2A-t04-global-adpstyle5.a2m 5.1510e+014.1506e+01 1adeA c.37.1.10
1dj2A/T0262-1dj2A-t2k-global-adpstyle1.a2m 5.1510e+014.2301e+01 1adeA c.37.1.10
1dj2A/T0262-1dj2A-t2k-global-adpstyle5.a2m 5.1510e+014.2301e+01 1adeA c.37.1.10
1d2jA/T0262-1d2jA-t04-global-adpstyle1.a2m 5.4066e+014.3367e+01 1ajj g.12.1.1
1d2jA/T0262-1d2jA-t04-global-adpstyle5.a2m 5.4066e+014.3367e+01 1ajj g.12.1.1
1d2jA/T0262-1d2jA-t2k-global-adpstyle5.a2m 5.4066e+014.6716e+01 1ajj g.12.1.1
1d2jA/T0262-1d2jA-t2k-global-adpstyle1.a2m 5.4066e+014.6716e+01 1ajj g.12.1.1
1lqsL/T0262-1lqsL-simplesw-adpstyle1.a2m 4.5197e+015.0853e+01 a.26.1.3
1lqsL/T0262-1lqsL-simplesw-adpstyle5.a2m 4.5197e+015.0853e+01 a.26.1.3
1r7lA/1r7lA-T0262-t2k-global-adpstyle5.a2m 4.2709e+015.1481e+01
1r7lA/1r7lA-T0262-t2k-global-adpstyle1.a2m 4.2709e+015.1481e+01
1lqsL/T0262-1lqsL-t2k-local-adpstyle5.a2m 4.5197e+015.2498e+01 a.26.1.3
1lqsL/T0262-1lqsL-t2k-local-adpstyle1.a2m 4.5197e+015.2498e+01 a.26.1.3
1lqsL/T0262-1lqsL-t04-local-adpstyle5.a2m 4.5197e+015.2732e+01 a.26.1.3
1lqsL/T0262-1lqsL-t04-local-adpstyle1.a2m 4.5197e+015.2732e+01 a.26.1.3
1dj2A/T0262-1dj2A-t2k-local-adpstyle1.a2m 5.1510e+016.0333e+01 1adeA c.37.1.10
1dj2A/T0262-1dj2A-t2k-local-adpstyle5.a2m 5.1510e+016.0333e+01 1adeA c.37.1.10
1dj2A/T0262-1dj2A-t04-local-adpstyle5.a2m 5.1510e+016.0851e+01 1adeA c.37.1.10
1dj2A/T0262-1dj2A-t04-local-adpstyle1.a2m 5.1510e+016.0851e+01 1adeA c.37.1.10
1dl0A/T0262-1dl0A-simplesw-adpstyle5.a2m 4.4873e+016.1658e+01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-simplesw-adpstyle1.a2m 4.4873e+016.1658e+01 1dl0A g.3.6.2
1d2jA/T0262-1d2jA-simplesw-adpstyle1.a2m 5.4066e+016.2088e+01 1ajj g.12.1.1
1d2jA/T0262-1d2jA-simplesw-adpstyle5.a2m 5.4066e+016.2088e+01 1ajj g.12.1.1
1dl0A/T0262-1dl0A-t04-local-adpstyle1.a2m 4.4873e+016.2764e+01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-t04-local-adpstyle5.a2m 4.4873e+016.2764e+01 1dl0A g.3.6.2
1p22B/T0262-1p22B-t04-local-adpstyle1.a2m 5.3605e+016.2831e+01 a.157.1.1
d.42.1.1
1p22B/T0262-1p22B-t04-local-adpstyle5.a2m 5.3605e+016.2831e+01 a.157.1.1
d.42.1.1
1dl0A/T0262-1dl0A-t2k-local-adpstyle1.a2m 4.4873e+016.2857e+01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-t2k-local-adpstyle5.a2m 4.4873e+016.2857e+01 1dl0A g.3.6.2
1p22B/T0262-1p22B-t2k-local-adpstyle1.a2m 5.3605e+016.2906e+01 a.157.1.1
d.42.1.1
1p22B/T0262-1p22B-t2k-local-adpstyle5.a2m 5.3605e+016.2906e+01 a.157.1.1
d.42.1.1
1d2jA/T0262-1d2jA-t2k-local-adpstyle1.a2m 5.4066e+016.3507e+01 1ajj g.12.1.1
1d2jA/T0262-1d2jA-t2k-local-adpstyle5.a2m 5.4066e+016.3507e+01 1ajj g.12.1.1
1d2jA/T0262-1d2jA-t04-local-adpstyle1.a2m 5.4066e+016.3655e+01 1ajj g.12.1.1
1d2jA/T0262-1d2jA-t04-local-adpstyle5.a2m 5.4066e+016.3655e+01 1ajj g.12.1.1
1dj2A/T0262-1dj2A-simplesw-adpstyle1.a2m 5.1510e+016.5411e+01 1adeA c.37.1.10
1dj2A/T0262-1dj2A-simplesw-adpstyle5.a2m 5.1510e+016.5411e+01 1adeA c.37.1.10
1dl0A/1dl0A-T0262-t04-local-adpstyle1.a2m 4.4873e+016.6860e+01 1dl0A g.3.6.2
1dl0A/1dl0A-T0262-t04-local-adpstyle5.a2m 4.4873e+016.6860e+01 1dl0A g.3.6.2
1dl0A/1dl0A-T0262-t2k-local-adpstyle5.a2m 4.4873e+016.6860e+01 1dl0A g.3.6.2
1dl0A/1dl0A-T0262-t2k-local-adpstyle1.a2m 4.4873e+016.6860e+01 1dl0A g.3.6.2
1p22B/T0262-1p22B-simplesw-adpstyle1.a2m 5.3605e+016.8233e+01 a.157.1.1
d.42.1.1
1p22B/T0262-1p22B-simplesw-adpstyle5.a2m 5.3605e+016.8233e+01 a.157.1.1
d.42.1.1
1autL/T0262-1autL-t2k-global-adpstyle1.a2m 2.6146e+017.0242e+01 1hcgB g.3.11.1
1autL/T0262-1autL-t2k-global-adpstyle5.a2m 2.6146e+017.0242e+01 1hcgB g.3.11.1
1dl0A/T0262-1dl0A-t04-global-adpstyle1.a2m 4.4873e+017.0363e+01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-t04-global-adpstyle5.a2m 4.4873e+017.0363e+01 1dl0A g.3.6.2
1autL/T0262-1autL-t04-global-adpstyle1.a2m 2.6146e+017.0443e+01 1hcgB g.3.11.1
1autL/T0262-1autL-t04-global-adpstyle5.a2m 2.6146e+017.0443e+01 1hcgB g.3.11.1
1dl0A/T0262-1dl0A-t2k-global-adpstyle5.a2m 4.4873e+017.1132e+01 1dl0A g.3.6.2
1dl0A/T0262-1dl0A-t2k-global-adpstyle1.a2m 4.4873e+017.1132e+01 1dl0A g.3.6.2
1r7lA/T0262-1r7lA-t04-global-adpstyle1.a2m 4.2709e+017.4153e+01
1r7lA/T0262-1r7lA-t04-global-adpstyle5.a2m 4.2709e+017.4153e+01
1r7lA/T0262-1r7lA-t2k-global-adpstyle5.a2m 4.2709e+017.5467e+01
1r7lA/T0262-1r7lA-t2k-global-adpstyle1.a2m 4.2709e+017.5467e+01
1r7lA/1r7lA-T0262-t04-local-adpstyle1.a2m 4.2709e+017.9300e+01
1r7lA/1r7lA-T0262-t04-local-adpstyle5.a2m 4.2709e+017.9300e+01
1fr8A/T0262-1fr8A-t2k-global-adpstyle5.a2m 3.2033e+018.0832e+01 1fgxA c.68.1.2
1fr8A/T0262-1fr8A-t2k-global-adpstyle1.a2m 3.2033e+018.0832e+01 1fgxA c.68.1.2
1r7lA/1r7lA-T0262-t2k-local-adpstyle5.a2m 4.2709e+018.1876e+01
1r7lA/1r7lA-T0262-t2k-local-adpstyle1.a2m 4.2709e+018.1876e+01
1fr8A/T0262-1fr8A-t04-global-adpstyle1.a2m 3.2033e+018.1919e+01 1fgxA c.68.1.2
1fr8A/T0262-1fr8A-t04-global-adpstyle5.a2m 3.2033e+018.1919e+01 1fgxA c.68.1.2
1r7lA/1r7lA-T0262-t04-global-adpstyle1.a2m 4.2709e+018.6413e+01
1r7lA/1r7lA-T0262-t04-global-adpstyle5.a2m 4.2709e+018.6413e+01
1r7lA/T0262-1r7lA-simplesw-adpstyle1.a2m 4.2709e+018.8712e+01
1r7lA/T0262-1r7lA-simplesw-adpstyle5.a2m 4.2709e+018.8712e+01
1r7lA/T0262-1r7lA-t2k-local-adpstyle1.a2m 4.2709e+018.8883e+01
1r7lA/T0262-1r7lA-t2k-local-adpstyle5.a2m 4.2709e+018.8883e+01
1r7lA/T0262-1r7lA-t04-local-adpstyle5.a2m 4.2709e+018.8969e+01
1r7lA/T0262-1r7lA-t04-local-adpstyle1.a2m 4.2709e+018.8969e+01
1dl0A/1dl0A-T0262-t04-global-adpstyle1.a2m 4.4873e+019.7665e+01 1dl0A g.3.6.2
1dl0A/1dl0A-T0262-t2k-global-adpstyle1.a2m 4.4873e+019.7665e+01 1dl0A g.3.6.2
1dl0A/1dl0A-T0262-t2k-global-adpstyle5.a2m 4.4873e+019.7665e+01 1dl0A g.3.6.2
1dl0A/1dl0A-T0262-t04-global-adpstyle5.a2m 4.4873e+019.7665e+01 1dl0A g.3.6.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001