Best Alignments for T0261

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1d7kA/T0261-1d7kA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1d7kA/T0261-1d7kA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.4569e+001.4854e-01 7odcA c.1.6.1
b.49.2.3
1vhcA/T0261-1vhcA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1vhcA/T0261-1vhcA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.2565e+002.7906e-01 c.1.10.1
1gmuA/T0261-1gmuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gmuA/T0261-1gmuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.9282e+003.5435e-01 d.58.38.1
b.107.1.1
1gmwA/T0261-1gmwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gmwA/T0261-1gmwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.2207e+005.1616e-01 d.58.38.1
b.107.1.1
1eulA/T0261-1eulA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1eulA/T0261-1eulA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.5297e+002.3796e+00 1eulA
1ihnA/T0261-1ihnA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ihnA/T0261-1ihnA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2319e+015.3221e-01 1ihnA c.103.1.1
1j96A/T0261-1j96A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1j96A/T0261-1j96A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2365e+012.3117e-01 c.1.7.1
1eb0A/T0261-1eb0A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1eb0A/T0261-1eb0A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3034e+012.5524e+00 d.58.38.1
b.107.1.1
1s1pA/T0261-1s1pA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1s1pA/T0261-1s1pA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3115e+012.9647e-01 c.1.7.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001