Best Alignments for T0257

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1bywA/T0257-1bywA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1bywA/T0257-1bywA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0568e+014.5374e+00 1bywA d.110.3.6
1gbg/T0257-1gbg-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gbg/T0257-1gbg-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.4313e+011.4715e+00 1axkA b.29.1.2
1o9uA/T0257-1o9uA-t2k-local-adpstyle1.a2m 1o9uA/T0257-1o9uA-t2k-local-adpstyle1.al 2.0895e+011.7300e+01 d.144.1.7
1h8fB/T0257-1h8fB-t2k-local-adpstyle1.a2m 1h8fB/T0257-1h8fB-t2k-local-adpstyle1.al 2.3010e+011.9315e+01 d.144.1.7
1h8fA/T0257-1h8fA-t2k-local-adpstyle5.a2m 1h8fA/T0257-1h8fA-t2k-local-adpstyle5.al 2.3115e+011.9416e+01 d.144.1.7
1uv5A/T0257-1uv5A-t2k-local-adpstyle1.a2m 1uv5A/T0257-1uv5A-t2k-local-adpstyle1.al 2.3150e+011.9453e+01 d.144.1.7
1ny9A/T0257-1ny9A-t2k-local-adpstyle5.a2m 1ny9A/T0257-1ny9A-t2k-local-adpstyle5.al 3.1214e+012.7342e+01 a.181.1.1
1vzoA/T0257-1vzoA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1vzoA/T0257-1vzoA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.3220e+019.9853e+00

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001