(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0257 AAG03475, Pseudomonas aeruginosa PAO1
              10             20        30        40          50        
              |              |         |         |           |        
   1 MAVDMFIKIGD.....VKGESKDKTHAEEIDVLAWSWGMSQSGSMHMG..GGGGAGKVNVQDLSF
   2 MAYDIFLKIDG.....IDGESMDDKHKNEIEVLSWRWNIHQESTMHAG..SGLGSGKVSVTNLDF
   3 MSYDIFLKIDG.....IDGESMDDKHKNEIEVLSWRWNIHQESTMHAG..SGLGSGKVSVTNLSF
   4 MAVDMFIKIGD.....VKGESKDKTHAEEIDVLAWSWGMSQSGSMHMG..GGGGAGKVNVQDLSF
   5 MAVDMFIKIGD.....VKGESKDKTHAEEIDVLAWSWGMSQSGSMHMG..GGGGAGKVNVQDLSF
   6 MAFDAFLKIDG.....IPGESGDDKHKDWIEIQSFSHKLEQPAQASAStaGGATAERVNHGVYEI
   7 MAQDMFIKIDG.....IEGESLDANHKNEIQVLAWNWDVAQHSNMHSG..SGGGSGKASVSDFCF
   8 MAQDMFIKIDG.....IEGESLDANHKNEIQVLAWNWDVAQHSNMHSG..SGGGSGKASVSDFCF
   9 MSQDIFLKIDG.....INGESLDDKHKDEIEILNWDWEIQQESSMHSG..SGGGAGKATVKDLTF
  10 MAFDAYIKIEG.....IPGEALDDRYKDCIEITGYGFGMHQSTSATASssGGASSGRTSLSDFTF
  11 MAFDAYLKIDG.....IPGEALDAQFKDWIEMENFDLGASQSASVTATsaGGATSGRARMSDLFF
  12 MAVDMFMKIEG.....ANGESKDANHKDWTDIVSFSWGATQPASLATG..GGQGVGKASFNDLHV
  13 MAFDTYIKLDK.....VDGESTDDKHKKWIEVLGFAWGAGNECTMESGt.QGLNTGKAMMSVLRV
  14 MAFDAYIQIAE.....ITGEALDQQYANWIEIVGYKFGVSQSTSATASsaGGASSGRTTLTNFTF
  15 MAFDTYIKLDK.....VDGESTDAKHKKWIEVLGFAWGAGNECSMESGt.QGLNTGKATMSVFRI
  16 MAFDAYVHIAE.....ITGEALDKQYANWIEIIGYKFGANQSTSATASsaGGASSGRTTLTNFTF
  17 ----IFLKLDN.....IKGESQVEGFEDQIEIMSYSHNVAMQVNNDVSl.TERTSGRAHVGEMSL
  18 MATPAYMSITGt14edSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSG..--QPTGQRVHKPVVI
  19 MATPAYMSITGt14edSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSG..--QPTGQRVHKPVVI
  20 MATPAYMSITGt14edSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSG..--QPTGQRVHKPVVI
  21 MAVDIFLKLDP.....IKGESLDDKHKDEIDILSWSFGESQSGTFHSG..SGGGAGKVSVQDLHF
  22 MAQDIFLKING.....IDGESPDAAHKNEIEVKSWGWRVSQQANMHAG..SGGGAGKATVDDLEF
  23 MATPAYMSITGt14edSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSG..--QPTGQRVHKPVVI
  24 MATPAYMSITGt14adSVGNTYQEGHEDQVMVQGFSHELIIPRDPQSG..--QPTGQRVHKPVKI
  25 ----IFLKLDN.....IKGESQVEGFEDQIEIMSYSHNVAMQVNNDVSl.TERTSGRAHVGEMSL
  26 MAFDAYIQIDG.....IPGEVLDEKHKDWIEVLGYEYGATQATSATASssGGASSERVALSDFKI
  27 MAFDAYIQIDG.....IPGEVLDDKHKDWIEVLGYEFGATQATSATASssGGASSERVALSDFSI
  28 MSSSIFLQIDG.....IKGESTDSKHKEWIELEHVNFGLFNHARIADSgkRKITVGAADFRTIDC
  29 -------KIEG.....ANGESKDANHKDWTDIVSFSWGATQPASLATG..GGQGAGKASFNDLHV
  30 ------MQFGSpa...VKGESADKDHQGWIELKSWDHSIVQPRSATAStaGGHTMTRCEHGDMIF
  31 -----ILDLGGd....IKGDSLLEGYADKIEVMSYSHNVAMQVTNDVSn.SERTSGKPHVGEFTL
  32 -----------.....-KGESADKDHQGWIELKSWDHSIVQPRSATAStaGGHTMTRCEHGDMIF
  33 ---DIYVKFDSpa...IKGESQDKDHKEWIEVNSWSQSIIQPRSATAStaGGHTAERCEHRDMVF
  34 MAFTGYLKIDD.....IKGESRRADHEDEIDAFGVSWLVEQTSSASTG..SGRTRGRARVGDFRL
  35 --------LGDd....IKGDSQIEGYTDKIELMSYSHNVAMQVTNDISn.SERTSGKPHIGEFTV
  36 MAMPAHMTLTGekqgkIDGSCELQGRENTIQLYEMKHDIHMPRNPHDG..--LPTGKRVHGPLSI
  37 -----------.....SVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSG..--QPTGQRVHKPVII
  38 MSTSMHLKIEG.....VQGESQESQHAAWLDIKSFTWGISQPGSLDSG..GGGTPGRASFTDLHV
  39 -----------.....SVGNTYQEGHEDQVMVQAFTHDVIIPRDPQSG..--QPTGQRVHKPVVI
  40 ----IILEITD.....IKGNTKITGHEDKIQIMSFSNGVSMHMNRDVSn.SERTMGRPDFQNITL
  41 --VDYFLHIEG.....VDGESPDQQYNGWIQVQAWQWAEENAGRWGLG..GGGGSGKVEMKDFEF
  42 ----------Sd....IKGDSLLVGYENKIEIMSYSHNVAMQVTNDVSn.SERTSGKPHVGEFTL
  43 MQSNTYLKYAD.....IKGEATAEQYKDMITLLSVDWSVGREISSYTGtaMDREASSTRLYDMTI
  44 MPTPAYIKIVGq14adSVGNVFQQGHEDQILVQEIKHEVTTPTDPQSG..--QPSGQRVHKPFIF
  45 MPTPAYIKIVGq14adSVGNVFQQGHEDQILVQEIKHEVTTPTDPQSG..--QPSGQRVHKPFIF
  46 ----AHLTLTGekqgkIDGSCELQGREKTILVYSMNHDIHMPKDPHSG..--LPTGKRVHGPLSI
  47 MQSNTYLKYAD.....IKGEATAEQYKDLITLLSVDWSVGREISSYTGtaMDREASATRLYDLTI
  48 MAIPAYLWLKDdggadIKGSVDVQGREGSIEVVALDHDVYIPTDNNTG..--KLTGTRTHKPFTF
  49 MQANTYLKYGD.....IKGETTAKDYEGMITLLSVDWGVGREITSFTGtaQDREASSTRLHDMTI
  50 -------KVDG.....VTGESADAQHKGWTDIQSFTWGASQPGAMASG..SGGNAGKASFNDLVV
  51 ---DIYVQFRGkyk..VDGESRDSEHKDWLEVNSWSHNIRQPKSATSSsvGGHTAERVEHSDMLF
  52 MVQDTFIKIGG.....IDGESQDVSHLNEIDVIGWRWKVSQQAAMMSG..SGGGAGKATVSDLEF
  53 MAIPAYLWLKDdggadIKGSVEVRGREGSIEIVALEHMLHIPTDNNTG..--KLTGTRVHAPLVF
  54 MAIPVYLWLKDdggadIKGSVDVQSREGSIEIVAQDHNLYIPTDNNTG..--KLTGTRIHTPFVF
  55 MAIPAYLWLKDdggadIKGSVDVHNREGSIEVVALEHALHIPTDNNTG..--KLTGTRVHAPLVF
  56 ----IYLKLDG.....IEGESRIKGFENQIKLIAYNHNPTKRES----..--GEARGTYIGGLTL
  57 ----IYLKLDG.....IEGESRIKGFENQIKLIAYNHNPTKRES----..--GEARGTYIGGLTL
  58 MPTPAYMSINGe14adSVGNTWQEAHVDEFLVQELDHVLTVPRDPQSG..--QPTGQRVHRPLVV
  59 ----IYLKLDG.....IEGESQIKGFENQIKLIAYNHNPTKRES----..--GEARGTYIGGLTL
  60 ---PIYLQIDG.....IQGDATHEEHRKWMDIEAIHWNVARNMNTSAGsaANREASEPTISEVIL
  61 ----IFVNYEG.....IKGESSDSGHKGWMDVEAVSWGVGRNITSNSStqGDRESSNAVISDLHV
  62 MAFDMHIKFGSgkvk.IEGASNHKKHKGEIPILAWSWGASNSGDLHTGg.GSASGGKAHVQDISV
  63 MKIDGFLKVPD.....IKGPSKRDGHEDEIEVHGVDYKMIAPYDPNSL..--SRRGRVSMGMIKF
  64 MANLIYASIDGe14ldSIGNRCQLGHEDQIYVYGFDHNIARAQN----..-------VAHQPIII
  65 ----------D.....IKGSVDIQNREGSIEILSFNHSLYIPTDSSTG..--KLTGTRVHGSMSF
  66 MANSIFMKITGk14idSVGNKHISGHEDEIFVYATNYDLSRDRH----..-------VNHHPFSV
  67 ----IFLKFTTe....IKGDATVAGYEDQIKLTSVSFGANRTVASVAGs.SARETGSPAFTELQC
  68 MANMIYVTIKGe14ldSIGNRYQHGHENQIMVLQFNHGLTVAQN----..-------VNYQPVNF
  69 -----WIKDDGgad..IKGSVTVSGREGSVEVVAFDHAVNIPTDSNTG..--KLTGTRVHKPIVF
  70 MANPAYMTITGk14peSVGNKYQKAHTDEIMVFALSHEMRRDNN----..----LGKAVHQPVII
  71 MANMIYLTLKGk14idSIGNKSQGSHIDQIFVLSLNHAMTREQN----..-------VSHHPISF
  72 -----WIKDDGgad..IKGSVTVTEREGSVEVVAFDHSVNIPTDSNTG..--KLTGTRVHKPILF
  73 MANPVYLTLNGe14mpSIGNKAQIAHQDQIMVTSLSHGLSRAQN----..-------VNHQELTI
  74 -----------.....--------------------------------..----------KPVVI
  75 MAFDAFIQIDD.....IAGEALDEQYTNWIEINGYNFGVNQSTSATAGssGGATSGRTTLTNFTF
  76 MAVDAYIKIEG.....IPGEALDDRYKDCIEITGYGFGMHQSTSATASssGGASSGRTSLSDFTF


      60        70        80        90          100        110         
      |         |         |         |            |          |         
   1 TKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGG...ENQVEYLIITL.KEVLVSSVSTGG.S...
   2 DHYIDRASPNLFKYCASGKHIPQAILVMRKA-G...GNPLEYLKYTF.TDLIVAVVSPSG.Sh..
   3 EHYIDRASPNLFKYCSSGKHIPQAILVMRKA-G...GNPLEYLKYTF.TDLIIAMVSPSG.Sq..
   4 TKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGG...ENQVEYLIITL.KEVLVSSVSTGG.S...
   5 TKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGG...ENQVEYLIITL.KEVLVSSVSTGG.S...
   6 THFLDKASPKIYEACCTGKHIKEITIELCRA-G...GDKVKYMEIKM.EQVLISKVEPHG.Sa..
   7 AHYIDKASPNLLSYCLLGKHIKNVQFVLRKA-G...GDPLEYLTIKF.TDVIITRVDMAG.Sl..
   8 AHYIDKASPNLLSYCLLGKHIKNVQFVLRKA-G...GDPLEYLTIKF.TDVIITRVDMAG.Sl..
   9 EHNIDRASPNLMKYALTGKHIDQAVLVMRKA-G...GNPLEYLKLTM.SDVIVTRVKPSG.Sk..
  10 TKSLDKSSCKLMESLCAGKHLKEVVLSLHRA-G...GDKVKYFEVLL.EEVIISNYTQHA.-...
  11 RKTVDKATPKLHEACCSGKHFKEVTLAVNRA-G...TDKLKYLEIVL.EEVIISSVSLNG.N...
  12 VARIDKAAPAVMKHCASGKHLGKIELSVCKA-G...GAQVEYSKVTL.EDVLVTSVQIAA.D...
  13 TKWMDCASVKLASAAVQGQNFPTLELEICTQ-A...GDKFAFCIYKF.THVAVSSYQCSG.At..
  14 TKYLDSASCKLLEASCAGQHLKEVKLVVCRA-G...TDKLKYYEVVL.EEVIIADYAQSA.-...
  15 TKWMDCASVKLASAAVQGQNFPSLEVEICTQ-A...GDKFAFCIYKF.TNVAISSYDCSGaS...
  16 TKYLDSASCKLLEASCAGQHLKEVKLVLCRA-G...GDKLKYYEVVL.EEVIIADYAQSA.-...
  17 TKFVDLATPVLNEYCCSGRLIRTAVLTLCRNDD...GKMRSLIVYTL.TNVLISQLSVSG.-...
  18 TKVFDKASPLLLAALTSGERLTKVEIQWYRTSAa..GTQEHYYTTVL.EDAIIVDIKDYM.Hnc6
  19 TKVFDKASPLLLAALTSGERLTKVEIQWYRTSAa..GTQEHYYTTVL.EDAIIVDIKDYM.Hnc6
  20 TKVFDKASPLLLAALTSGERLTKVEIQWYRTSAa..GTQEHYYTTVL.EDAIIVDIKDYM.Hnc6
  21 THFVDKATPELFKVCANGKHIDTAILTVRKA-G...ENPLEYLKIEM.KHILVTSVSTGG.S...
  22 EHLVDRASPNLMKYCLTGKHVDQAVLVVRKA-G...GNPLEFLKITM.SDVIVTQVHPSG.S...
  23 TKVFDKASPLLLAALTSGERLTKVEIQWYRTSAa..GTQEHYYATVL.EDAIIVDIKDYM.Hnc6
  24 TKVFDKSSPLLLAALTSGERLTEITIQWYRTSAa..GTQEHYYTTKL.EDAIIVDIKDYM.Hnc6
  25 TKFVDLATPVLNEYCCSGRLIRTAVLTLCRNDD...GKMRSLIVYTL.TNVLISQLSVSG.-...
  26 RKAVDKASAKLFEHCCTGKHIAKLKLNVNRA-G...GDKVTYLTIDM.EEVVVSSVKFVA.Ggn6
  27 RKSVDKASAKLFEACCKGTHIAKIQLNVNRA-G...GDKLTYLTINL.EEVVVSSVKAVA.Ggs7
  28 VKVMDSSSIGLLSAVAQGTAIKKVKLEICTIFK...GEMHPYAEVEM.DECIISDVHETC.S...
  29 VARIDKAAPAVMKHCASGKHLGKIELSVCKA-G...GAQVEYSKVTL.EDVLVTSVQIAA.D...
  30 TKEIDSSSPLLYQHASGGTTFDEVTVHFSRADGe..GKRVQYLEVKL.KYVIISSIAPSV.-...
  31 TKFVDTSTPSLNEYCCAGKPIPEAKITIGRNAAegsGQLLPFIIYTL.TNVVISNVSVSG.-...
  32 TKEIDSSSPLLYQHASGGTTFDEVTVHFSRADGe..GKRVQYLEVKL.KYVIISSIAPSV.-...
  33 SKDLDVVSPLLYQHASGGTTFGEVTIEFFRADGe..GNRVKYLEVKL.KNAILSEVDSQV.-...
  34 RKWMDASSPYLALACMQGKSFPEMIFMARKDSG...EAHLDYLQVTL.KNCIVSSYALAQ.Dape
  35 TKFVDTSTPSLNEYCCAGKAIPEVKITVGRNAAesdGKILPFIVYTL.NNVVLSNVSVSG.-...
  36 VKMFDKSSPKLYQALCTGEHMKNVQIKWYRINKq..GLEEHYFTTTL.EDAIVVEMKPYM.Pmt6
  37 TKVYDKASPLLQAALTSGERMSEIVIQWYRTSAq..GTQEHYYTTKL.EDAIIVAINNKM.Hnc6
  38 VSYVEASAPTAFKKCANGTSLGTVELSCSRLSD...GDKMVFMTITL.TNVLVTKADIKG.Vdrd
  39 TKVYDKASPLLQAALTSGERMSEIVIQWYRTSAq..GTQEHYYTTKL.EDAIIVAINNKM.Hnc6
  40 SKMTDQATPGLYGACAGGKDLGVVKLLMGRNEG...DTFMPLMTYTL.KNTMVSNISTGG.-...
  41 RMVSNKASPKLFLMCAIGEHIPQAKLVCRKS-G...QGQQDFLIVTF.SNCLVSSFKTVG.Nm10
  42 TKFIDTSTPTLNEYCCAGKPIAEATITIGRNAAegnGQIMPFIVYTL.NNVVLSNVSVSG.-...
  43 TKLQDKASPDLFKEATIGKGK-PAVFHITKQ-G...EKIEEIMKIQL.TDAMISNYAVSI.-...
  44 TSSLNKATPLMYQALATGEMLPTVEVSWYRTSSe..GKQEHFFTTTL.EDATIVSINTVL.Pha6
  45 TSSLNKATPLMYQALANGEMLPTVEVSWYRTSSe..GKQEHFFTTTL.EDATIVSINTVL.Pha6
  46 VKEFDASSPKMYQALCTGEHLKDVTLKFYRITKq..GTEEHYYTIKL.EDAIVVSMKPYM.Pvt6
  47 TKLQDRSSPDLFKEATIGKGK-PAVFHITKQ-G...EKVEEIMKIEL.TDAMISNYSVSI.-...
  48 TKEIDASSPYLYKAVTTGQTLKTAEFKFYRINDa..GQEVEYFNITL.DNVKLVRVAPLM.Hdi6
  49 TKLQDKASTYLFKEATIGKGT-DIQFYVTRQ-G...DKVEEILKLEL.TDAMIANFNVVV.-...
  50 AAYMDKGAPAIIKNCANGKHLSTVEISACKT-G...GTQVEFMRVTL.QEVLVTSAQVAG.Idpg
  51 VKDLDATSPKLWEACSAGYTFDEVQIDFYRANG...DKRIKYLQIKL.KHVLVSSVTPTV.-...
  52 THQLDRASPNLTRYCFTGKHIDQAKLTVRKA-G...GLPFEYLKITM.YDVVITQVEPIG.-...
  53 TKEVDASSPYLYKAVTTGQTLKSAEIKWYNIDDa..GQEKEYFITQL.DNVKVVKVAPLM.Hdi6
  54 TKEIDASTPYLYKAVTTGQTLKTAEFKWYRIDDa..GQEVEYFNTKL.ENVKVVKVAPKM.Hdv6
  55 TKEVDASSPYLYKAVTTGQTLKSAEFKWYQIDDa..GQEKVYFITHL.NNVKVVKVAPLM.Hdi6
  56 TKPVDLATPGLYEHYCNGKTVKEGVLTLCRRDK...GAMLPFIIYTL.TNVRISRMSNHG.-...
  57 TKPVDLATPGLYEHYCNGKTVKEGVLTLCRRDK...GAMLPFIIYTL.TNVRISRMSNHG.-...
  58 TKVQDRSSPLLFNALVSGEKLPECLIRFYRTSVq..GKQEHYYSIKL.IDALLVDIQTRM.Nhc6
  59 TKPVDLATLGLYEHYCNGKTVKEGVLTLCRSDK...GAMLPFIIYTL.TNVRISRMSNHG.-...
  60 TKVSDSSSTKLFQEACAGRTGKLATIHLVTT-G...NPGNTYIEYLL.TNTLIASYSVDS.-...
  61 TRYMDSSTPKLFIESCCGTGK-EVKIHLSKTGSg..SGADVYMEYTL.KNALISSYSVNAvS...
  62 TKYVDGCSNALLDAVCTGARVENAWLYVTNA-T...GEQSDFLTLELsEGVLITSLSTGG.S...
  63 IKHYDKSSPYLKKALFENKALDEVVFSARRTID...GETSDYLVVTL.TDASVMEYDMRQ.At..
  64 TKPIDKSSPLLGMSISNNEKL-QIVLYMYRINSs..GSLEVFYTIKL.KDAYISNISQHC.Pnal
  65 EKEFDRASPYLYKAVATGQTLQSANIKWYRIDNa..GQEEEYFHILM.SGVKIVSISPVM.H...
  66 TKAVDKSTPLVLTSIANNELL-EVELRYYRTSAs..GTQENYMTITL.RDASIVNLSNQN.Pnsl
  67 AKDFDIASTELFMQSVSGASLQGATLTYLQTDNe..GNPQVYLTVTL.VDPIVTSYSQSS.-...
  68 IKLLDKSSPLLMIAAANHERL-ELTFDIYRTSQi..GSQELFYSILL.TGAKICDLNVNC.Phvi
  69 TKETDASTPYLYKAVTSGQTLKSIEIKWYKIDDa..GKEKEYFNTKL.ENVKVVGVTPKM.Ldik
  70 TKAVDKSSPLLAQAHSNSEEL-ECTISLYRTSPq..GQQEKFYSISL.DGAVLAELSQEV.Phvi
  71 IKPIDKSSPLLGVAISENELL-DAVFDFYRTNSa..GALELYYTISI.TGATISDISTSH.Shsi
  72 TKETDASTPYLYKAVTSGQTLKSIEIKWYKIDDa..GKEKEYFNTKL.ENVKVVGVTAKM.Ldik
  73 TKPVDKSSPLLGKAISENECL-TCDFVFYRTNRf..GINEPYYKLKL.ANARLSNIGLTV.Phti
  74 TKVFDKASPLLLAALTSGERLTKVEIQWYRTSAa..GTQEHYYTTVL.EDAIIVDIKDYM.Hnc6
  75 TKFLDSASCKRLEASCSDPHLKE----------...-----------.------------.-...
  76 TKL------------------------------...-----------.------------.-...


               120       130       140       150       160  
                |         |         |         |         |  
   1 ..G.....GEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
   2 ..D.....GEIASRETVELSFSTVKQEYVVQNQQGGS-GGTITAGYDFKANKEI
   3 ..G.....GEIASRESIELSFSTVKQEYVVQNQQGGS-GGTITAGYDFKANKEI
   4 ..G.....GEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNV--
   5 ..G.....GEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNV--
   6 ..T.....DSGFPAEKVSFSYGKIKWTYTQQKRADGAGGGNVSAGWDLTANK--
   7 ..E.....DETRPREEIRFSFTKMTQDYVMQNAEGHK-SGVISANYDVKAN---
   8 ..E.....DETRPREEIRFSFTKMTQDYVMQNAEGHK-SGVISANYDVKAN---
   9 ..A.....GEEKSRETVSLSFSKVKQEYVVQNAQGGS-GGAVTASFDIKGNKE-
  10 ..-.....NDGIPSETISLNYGKIKTTYTQQKRSDGAGGGNVSGGWNRINNK--
  11 ..Ggv...EGGFPTETVRLNYGRIKMTYTQQKRADGQGGGQVVGGWDAISNK--
  12 ..N.....GSEAVLVNYAFQAAKVRQQYWEQTESGGK-GAESLVAWDIKQNKEI
  13 ..G.....GSDRPQETIDFAYKEVTWEYVPQDQNGKAGGKIGPEGWSLITNKK-
  14 ..-.....SSGVPMEVVQLNYGRINTTYTRQKRLDGSAGGNVTGGWDRINNKK-
  15 ..G.....GSDRPQETIDFAYKEVTWEYIPQDQSGKAGSKIGPEGWSLITNQK-
  16 ..-.....SAGVPVEVVQLNYGRIKTIYTRQKRLDGSAGGNVTGGWDRINNKK-
  17 ..G.....AGGKPVETMSLNFTKIEWQITAEKSDGAQ-QESRTSVWDLAMN---
  18 pgN.....AHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSP------------
  19 pgN.....AHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSP------------
  20 pgN.....AHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRS-------------
  21 ..H.....GEDRLTENVSLNFAKVKMTYKTQTEKGGA-GAAPVFGWDVPANKE-
  22 ..N.....GDDGIREHVRLSFAKVRQEYVVQNAQGGS-GGAVTAGYDIKGNKE-
  23 pgN.....AHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSP------------
  24 paN.....AHFTHLEDVEFTYRKITWTHEVSGTSGSDDWRS-------------
  25 ..G.....AGGKPVETMSLNFTKIKWQITAEKSDGAQ-QESRASVWDLAM----
  26 ge-dka..VSDLPVEEISFNFARIKTTYTQQNRTDGQAGGNIVGGWDRTANK--
  27 ed-na...VSDLPIEEISFNFARIKTTYTQQSRSDGQGGGNVTGGWDRTANK--
  28 ..R.....GGEFPQEQISIAYSKIKWTFTPLKEDGTKGTKVGPEGWDLIENKK-
  29 ..N.....GSEAVLVNYAFQAAKVRQQYWEQTESGGK-GAESLVAWDIKQNKEI
  30 ..R.....EEGLPIETFSLKYAAVQWKQTQQKIGGNQ-GGNTQGAWSLTKNDK-
  31 ..G.....TGGKPVETLSLNFTKIKWELTAQKDDGTK-EGTAASTWDMAANK--
  32 ..R.....EEGLPLETFSLKYAAVQWKQTQQKIGGNQ-GGNTQGAWSLTKNDK-
  33 ..A.....AEGIPTDTFSLRYAAVQWKYTQQKSAGGQ-GGNSQGAWSLTKNDK-
  34 e.S.....GHDMIAEDVAISFETITYKYVVQADDHSA-GDEHEVEYN-------
  35 ..G.....AGGKPVETLSLNFTKIKWELTAQKNDGSK-EGTAASTWDLAANK--
  36 paN.....EPYGHMEEVAFSYKKIKWTWEPNGIEA-------------------
  37 pgN.....SHFTHLEEVQFTYRKITWTHEVSGTSGSDDWR--------------
  38 ..D.....EQERLLIEYAFQAPEVEFGYTPQQDDGSA-GGEVTMGWNIPQNTE-
  39 paN.....AHFTHLEEVHFTYRKITWTHEVSGTSGSDDWR--------------
  40 ..-.....GGSEAMDTFCLDFTEIKVEYTKQGSDSKK-QGTAAFGWDLATNK--
  41 vfT.....DTVLPTDAISLNFARIEVEYKEQQPDGSM-GAVIKAGYDLKLNS--
  42 ..G.....AGGKPVETLSLNFTKIKWELTAQKDDGTK-EGTAASTWDLAANQ--
  43 ..-.....QDDRPIETITISYTEMMMTVTPTDDKNNT-SAPLVYGYSGVKGQ--
  44 kdN.....ENYTQLVEVSLAYRKITWAHDVANTEGSDDW---------------
  45 kdN.....ENYTQLVEVSLAYRKITWAHDVANTEGSDDW---------------
  46 eeN.....NPYRHMEEVAFTYRKIKWTWEPNGIEA-------------------
  47 ..-.....QDDRPVETITISYTEMMMTVTPTDDKNNT-SAPLVYGYSGVKGQ--
  48 psR.....EKHNHLERIEFRYEKITWTYKDG-----------------------
  49 ..-.....NDDRPTETITISYTEMVMTVTPTDDDNNL-EPKVVWGYSGVTGQ--
  50 ..D.....VADRLMMHYGFQAAKVKKQYWQQNDNGGK-GAEVTVGWNIKENTE-
  51 ..N.....EEGVPTEVFGLKYAAVEWTYNQQDINGSA-KGAVTKKWSLSNN---
  52 ..-.....GGEVCHEEVCLSFSTMKQEYFVQNALGGS-GGAVTATLY-------
  53 ptK.....EKHNHLERIELRYEKITWTYK-------------------------
  54 paK.....EKHNHLELVELRYEKITWTFKD------------------------
  55 ptK.....EKHNHLERVELRYEKITWTYKD------------------------
  56 ..D.....AEGSATETVDLVYSHIRWDI--------------------------
  57 ..D.....AEGSATETVDLVYSHIRWDI--------------------------
  58 aaT.....ADRVTEEVLKFTYRAIEVTHENCGTAGNDDW---------------
  59 ..D.....AEGSATETVDLVYSHIRWDI--------------------------
  60 ..-.....SGDRPVETIKLNFTKMEVKYTPFDDNNSP-QSPMIASYDLAT----
  61 ..Q.....DNHRPTETFTITFVDVEVKYTPYDEDGNA-EAAIAVGFDTASN---
  62 ..G.....GEDRLTENVTLHFGKFKYGFQPQDDKGASQGGAKEFTYDI------
  63 ..D.....EADLIEEEVSFAYKKIKFVYD-------------------------
  64 t.H.....NDIQPYEIISISYKSIDWEHNISGTSGY------------------
  65 ..Nik6syQHLNHLESVEIRYEKITWKYL-------------------------
  66 t.H.....NDMQPFETLSLRYESITCQHNIAGTSG-------------------
  67 ..M.....GDSKPCENFTLNFTEIKMAYTKYDGDSAK--KATEKGWNLSE----
  68 n.D.....NNGQPEEVISVQYVNITCRHHMAGTSG-------------------
  69 ..-npay.EKHNHLEDIELRYEKIIWSYK-------------------------
  70 l.Q.....NDAQPQEQLAIRYRGISWVHHIAGTTGHTSW---------------
  71 t.H.....NGSQPQETISLKYKSITWNHNVAGTSG-------------------
  72 ..-npay.EKHNHLEDVELRYERITWSYK-------------------------
  73 n.D.....SPGQAEESVSFTYESINWEHSVAGT---------------------
  74 pgN.....AHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRS-------------
  75 ..-.....----------------------------------------------
  76 ..-.....----------------------------------------------