Best Alignments for T0255

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1kw3B/T0255-1kw3B-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kw3B/T0255-1kw3B-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3254e-023.4454e-05 d.32.1.3
1gdgA/T0255-1gdgA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gdgA/T0255-1gdgA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.7310e-023.7220e-05
1dhy/T0255-1dhy-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dhy/T0255-1dhy-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.4309e-022.1238e-04 1han d.32.1.3
1lkdA/T0255-1lkdA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lkdA/T0255-1lkdA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3412e-011.5774e-04 d.32.1.3
1lgtA/T0255-1lgtA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lgtA/T0255-1lgtA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.5525e-013.5347e-04 d.32.1.3
1kllA/T0255-1kllA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kllA/T0255-1kllA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1976e+003.4983e-04 d.32.1.2
1f9zA/T0255-1f9zA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f9zA/T0255-1f9zA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6854e+004.0149e-04 1qipA d.32.1.1
1jc4A/T0255-1jc4A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jc4A/T0255-1jc4A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.4619e+006.1149e-02 1jc4A d.32.1.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001