(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0255 AAG06109, Pseudomonas aeruginosa PAO1
              10                 20            30             40       
              |                  |             |              |       
   1 MNSKNTICLWY....D.S....AALEAATFYAETF....PDSAVLAVHRAPG.....DYPS....
   2 ---KNTICLWY....D.G....DAEDAARFYARTF....PDSSVGAVFRAPG.....DFPS....
   3 -ISKNTICLWY....D.G....GALDAANFYAATF....PDSSVGAVHRAPG.....DYPD....
   4 -PSKNTICLWY....D.G....TAEEAARFYAATF....PDSAVGPILRAPG.....DYPS....
   5 ---KNTICLWY....D.G....DAEDAAWFYAQTF....PDSSVGAVYRAPG.....DFPS....
   6 ---KNTVCLWY....D.D....CAEDAARFYADTF....PDSFVGAVHRAPG.....DFPS....
   7 --SKNTICLWY....D.G....DALDAATFYAKTF....PDSAVGAVFRAPG.....DYPD....
   8 --RKNTICLWY....D.G....GAVDAATFYAEIL....PDSAVGAVLRAPG.....DYPD....
   9 -MEKNTICIWY....D.K....DAEAAARFYAETF....PDSAVTAVHHAPS.....DFHS....
  10 --AKNTICLWY....D.H....DAEEAANFYARTF....PDSRVVAVHQAPA.....DYPS....
  11 ---GFTTCLWF....D.G....DAEDAAHFYVSVF....KNSGIGAVTRYPE.....G-AP....
  12 ---GFTTCLWF....D.G....QAEEAADYYVSVF....KNSRLGRVGRYPE.....G-GP....
  13 -MQKITTFLWF....D.G....QAEEAMNHYMSIF....KNSKELSVTRWPK.....G--H....
  14 -ISKNTICLWY....D.S....AALEAATFYAETF....PDSAVLAVHRAPG.....DYPS....
  15 -ISKNTICLWY....D.G....AALEAARFYAETF....PDSAVGAVLHAPG.....DYPA....
  16 ---KNMICLWY....D.K....DAEEAARFYSDVF....PDSAVTAVHHAPS.....NYPS....
  17 --EKNTICIWY....D.K....DAEAAARFYAETF....PDSAVTAVHHAPS.....DFHS....
  18 -FQKLTPCLWF....D.D....QAEAAAKFYCSIF....DHSKITALTHYSKvgq..EFHG....
  19 -MQKIAPCLWF....D.G....KAEEATRFYTSVF....SDSRIATTMHYTD.....A-GP....
  20 --SKNTICLWY....D.S....AALEAATFYAETF....PDSAVLAVHRAPG.....DYPS....
  21 --SKNTICLWY....D.S....AALEAATFYAETF....PDSAVLAVHRAPG.....DYPS....
  22 -MQKITPFLWF....D.S....QAEEAVNFYISIF....KNSKILSTVRYGE.....A-GP....
  23 --SKNTICLWY....D.K....DAEEAARFYADTF....PGSKIGAVIRAPG.....KYPD....
  24 --SKLVPCMWF....N.G....DAEEAAKFYVSLV....PNSEITHVQRNVS.....DGPS....
  25 ---PLTICLWY....K.G....DAEEAANFYAETF....PDSHVSAVFRAPS.....DFPG....
  26 -IQRITPFLWF....D.S....DAEAAARFYVSVF....DNARIVHVARYGKaga..HASG....
  27 --SKITPCLWF....D.D....QAEAAAQFYTSIF....RNSKIVHVSRYGDagq..EMKG....
  28 -IQRITPFLWF....D.R....DAEAAARFYVSVF....DNARIVDVARYGKaga..QAAG....
  29 --TRIVPCLWF....D.H....QAEEAARYYADIF....DNSRVGAISRYDEagk..EVHG....
  30 ---TLTTCLWF....D.G....QAEEAARFYCGLL....PRSEITEVLHAPT.....DYPA....
  31 --TRIVPCLWF....D.H....QAEEAARYYADIF....DNSRVGAISRYGEtgk..EVHG....
  32 -IQKITPFLWY....A.A....EAEEAAAFYAGIF....PDSRIVRVTAVPG.....T---....
  33 --QKIATCLWF....DhG....EAGKAAEFYAATF....PDSRVERVNTAPG.....DFPG....
  34 --PSITPSLWF....D.D....NLEEAATFYTSVF....PNSHIEGFNRTTE.....A-GP....
  35 ---ELVTCVWF....DhG....EASKAAAFYAKTF....PNSEVGRVNTAPG.....DFPG....
  36 --PKIISHLWF....P.E....NAREAVDFYVSTI....PNSAISGSTTVPA.....ETPS....
  37 -MTSITPFLWF....D.N....NVPEAVAFYKSVF....PNAEVETVSDF--.....----....
  38 -IQKITPFLWY....T.T....EAEDAAAFYAGIF....PNSRVVRVTAVQG.....T---....
  39 --SKIVPCLWF....A.G....EAEQAAQFYVSLL....PGSRIDNIQRSVV.....DTPG....
  40 --ERITTCLWF....Q.D....QAEEAANYYVTTF....APYSKVNTTQRNT.....-LPG....
  41 ---DLVTFLMFvgkqH.G....KAEEAIRFYTSQF....PNSKINDIQRYTT.....D-QS....
  42 ---DLVTFLMFvgkqH.G....KAEEAIRFYTSQF....PNSKINDIQRYTT.....D-QS....
  43 --AKIIPSLWF....D.N....NAKEAMNYYVSVF....PNSKIKNIEYYPDekld.EHFV....
  44 --AKIIPSLWF....D.N....NAKEAMNYYVSVF....PNSKIKNIEYYPDekld.EHFV....
  45 ---SITPFLMF....N.A....NPEEAANFYVSIF....KKSKILRANSMQA.....D---....
  46 ---SITPFLMF....N.A....NPEEAANFYVSIF....KKSKILRANSMQA.....D---....
  47 -TQKITPSLLF....S.GsvtgKAEEAMEFYTSIF....ENSEITFINRYAE.....GEAK....
  48 --QRLVPTLMFmhqnN.G....KAMEAMEFYTSTF....PNSKIEGVLKYKDg....GENG....
  49 ------QHLWF....E.K....DMEAALRLYTTLI....PGSSVNSVTALPA.....DSPS....
  50 --KKIVPSLWFg...D.N....NCEEAINYYVNVF....PNSEIQKIVRYPNeald.EHFK....
  51 --QKITTFLMF....E.G....KAEEAMNFYTSLF....EQSEIVSISRYDE.....N-GP....
  52 --QKITTFLMF....E.G....KAEEAMNFYTSLF....DQSEIVSISRYDE.....N-GP....
  53 --QKITTFLMF....E.G....KAEEAMNFYTSLF....EQSEIVSISRYDE.....N-GP....
  54 --QKITTFLMF....E.G....KAEEAMNFYTSLF....DQSEIVSISRYDE.....N-GP....
  55 --QKITTFLMF....E.G....KAEEAMNFYTSLF....EQSEIVSISRYDE.....N-GP....
  56 ---AVIPTLLF....G.GaaqnQAGPAQENYVEVF....PNSQLGDRAPYGQ.....QTGP....
  57 ---AVIPTLLF....G.GaaqnQAGPAQENYVEVF....PNSQLGDRAPYGQ.....QTGP....
  58 -----------....-.-....-------------....-------------.....----....
  59 -IPKITTFLMF....N.N....KAEEAVKLYTSLF....EDSEIITMAKYGE.....N-GP....
  60 -IPKITTFLMF....N.N....QAEEAVKLYTSLF....EDSEIITMAKYGE.....N-GP....
  61 -IPKITTFLMF....N.D....EAEEAIQLYTSLF....EDSEIITMVKYGE.....E-GP....
  62 -MQKITPFLMF....D.N....NLGEALKLYASTF....SDWKLLS------.....--QN....
  63 -MQKITPFLMF....D.N....NLGEALKLYASTF....SDWKLLS------.....--QN....
  64 --PKFSPCLWF....N.T....QAEEAANFYTTIF....EKGAILSKTNYVN.....EEHQ....
  65 --EKIIPHLWY....D.K....EAKEAAEFYISLF....ENSKLLNTAVLDN.....T---....
  66 ---YVQPYLFF....G.G....RCEEALEFYRTTL....GAQVDMLMRHKESpe7pgMLAP....
  67 ----INTYLIF....D.G....NCEEAFKRYAEVL....RGNIPMLMHFGDApdqs.QMPP....
  68 --QQVHPFLMF....E.G....KAEEAINLYQSVF....SDVDIPFIERYGS.....E-VE....
  69 ----IVPYLIF....N.G....NCREAFSCYHQHL....GGTLEAMLPFGDSpecg.DIPA....
  70 ---RVRPFLMF....Q.Gv...QAEAAMNFYLSLF....DDAEILQIQRYGA.....E-GP....
  71 -MQKITPNIWC....Q.G....TADEAAEFYVNAFsefpGGAEVLTTVKYPEagll.DFQE....
  72 ---SVRNYLFF....A.G....RCQEALDFYTQHL....GAKVEFKMHFNESpe7adMLQK....
  73 -MQKITPNIWC....Q.G....TADEAAEFYVNAFsefpGGAEVLTTVKYPEagll.DFQE....
  74 ----INSYLNF....N.G....NCKAAFKFYEQYL....GGKIIMMLTHGDAptae.HVPV....
  75 ----VQPYVFF....N.G....RCEEALDYYCAKL....GAQVTFKMRYKEApp6qnQPRP....
  76 --KRISTFFTF....N.G....NGEEAFNFYLDTF....PDAKKIGLTYFTK.....PEQG....
  77 --KRISTFFTF....N.G....NGEEAFNFYLDTF....PDAKKIGLTYFTK.....PEQG....
  78 --SRLNPYLSF....D.G....DARQAMEFYGQVF....GGTPALNTFGSAG.....MPDP....
  79 --KRISTFFTF....N.G....NGEEAFNFYLDTF....PDAKKVGLTYFTK.....PEQG....
  80 -----QPYVCF....N.G....RCEEALRFYEHAI....GARVSFLFRFDEApgpv.VVPE....
  81 -----QAYINF....D.G....NCREAVEFYAEVF....ETKKPKIMVYGDMpp6gaKFNE....
  82 ------PYLFY....Q.D....TCEAAFNFYAKVL....GGKIDAMMRVSDAppdm.PAAP....
  83 ---AIEIYMNI....N.G....RGAEAITFYEEAF....NTKAEHVTTFAQGwp...DCPP....
  84 -----QPYLFF....E.G....RCEEALEFYKKTL....GAKVDMLMRYKDApp9ae----qc6v
  85 ---QLTPYLYF....A.G....RCAEALEFYHHCF....GGRVTNIRLFKDApq...YIES....
  86 -----------....-.-....-------------....-------------.....----....
  87 --GGLTPYLQV....D.G....-AFKAADFYKKAF....GAEQVFA------.....-YPA....
  88 -----------....-.-....-------------....-------------.....----....
  89 -----------....-.-....-------------....-------------.....----....


            50         60                70                 80         
            |          |                 |                  |         
   1 .GKEGDVLTVEFRV.MGIPCLGLN..G..G..PA..FRH....SEA.....FSFQVAT..D....
   2 .GKKGDVLTVEFTV.MGIPCLGLN..G..G..PE..FTH....NEA.....FSFQVAT..V....
   3 .GQEGDVLTVEFTV.MGIPCLGLN..G..G..PH..FKH....NES.....FSFQVAT..D....
   4 .GQQGDVLTVEFTV.LGIPCLGLN..G..G..PE..FKH....SEA.....FSFQVST..E....
   5 .GKKGDVLTVEFTV.MGIPCLGLN..G..G..PE..VKH....NEA.....FSFQVAT..V....
   6 .GKQGNVLTVEFTV.MGIPCIGLN..G..G..PV..FTH....NEA.....FSFQVAT..T....
   7 .GKQGDVLTVEFTV.AGIPCVGLN..G..G..PH..FKH....SEA.....FSFQIAT..D....
   8 .GKQGDVLTVEFTV.AGIPCLGLN..G..G..PH..FKH....NEA.....FSFQIAT..D....
   9 .GKKGDVLTVQFTV.AGVSCIGLN..G..G..PT..FKH....SEA.....FSFQIST..E....
  10 .GKQGDVITVEFTV.MGIPCVGLN..G..G..PA..FKH....CEA.....FSFQVST..A....
  11 .QPAGSVLTVEFTA.NGQKFVGLN..G..G..PQ..FKF....NEA.....ISFQVTC..E....
  12 .GPAGSVMVVEFVA.NGQKFVALN..G..G..PQ..FTF....SEA.....VSFQIFC..D....
  13 .ADEGKVLVASFEL.DGVPFLALN..G..G..PQ..YKF....TEA.....ISLSIDC..K....
  14 .GKEGDVLTVEFRV.MGIPCLGLN..G..G..PA..FRH....SEA.....FSFQVAT..D....
  15 .GHQGDVLTVEFTV.MGIPCLGLN..G..G..PG..IKH....NEA.....FSFQVAT..D....
  16 .GKEGDVLMVEFTV.AGVPCLGLN..G..G..PA..FKH....NEA.....FSFQIST..E....
  17 .GKKGDVLTVQFTV.AGVSCIGLN..G..G..PT..FKH....SEA.....FSFQIST..E....
  18 .RPEGSVMTVSFEL.DGHTFTGLN..G..G..PV..FKF....NEA.....ISFQVNC..Q....
  19 .GPKGDVLAVTFEI.EGQEFMALN..G..G..PQ..FTF....TPA.....ISLFVHC..G....
  20 .GKEGDVLTVEFRV.MGIPCLGLN..G..G..PA..FRH....SEA.....FSFQVAT..D....
  21 .GKEGDVLTVEFRV.MGIPCLGLN..G..G..PA..FRH....SEA.....FSFQVAT..D....
  22 .GPKGAVMSMTFQL.EGQEFIALN..G..G..PE..FTF....SPA.....ISFFVNC..E....
  23 .GEEGDVLVVEFTV.AGVACIGLN..G..G..PT..FKH....SEA.....FSFQIST..E....
  24 .GKTGSVLVVEFTV.AGQPLVALN..G..G..MK..MEY....THA.....ISLMIHC..D....
  25 .GGEGTVLTVGFTV.LGIPCIGLN..G..G..PQ..FPH....TEA.....FSFQVAT..D....
  26 .SAEGAVMTVAFEL.DGQAFVALN..G..G..PV..FQI....TPA.....VSFVVNC..R....
  27 .KPAGAVMTVSFEL.DGQPFTALN..G..G..PT..FKF....NEA.....ISFQIFC..D....
  28 .QAEGAVMTVSFEL.DGQAFLALN..G..G..PA..FPL....TPA.....VSFVVNC..R....
  29 .RAPGSVMTVQFEL.DGTPFTALN..G..G..PA..FQF....SPA.....ISLQVSC..A....
  30 .GRTGDVLDVSFTL.MGRPFLALN..G..G..AY..TQF....TEA.....VSLMIPC..R....
  31 .RAPGSVMTVQFEL.DGTPFTALN..G..G..PA..FQF....SPA.....ISLQVSC..A....
  32 .---DGTRMVEFEL.FGQPFFAMS..H..P..RT..DTF....NHA.....ISLLVSC..A....
  33 .GQEGNELTVEFTV.LGQSFIGLN..G..G..PN..FTP....DQA.....VSFMVLT..N....
  34 .GEPGTVLSGSFVL.DGSRFIGIN..G..G..PH..FRF....SEA.....VSFTVHC..K....
  35 .GKKGTELTVEFTV.LGRKFVGLN..G..G..PV..FKP....NES.....VSFMVIT..E....
  36 .GPPGSVTVIEFRL.GDQNFTALE..A..G..PL..DPF....NHA.....YSIQVAC..D....
  37 .-------MAVFEL.EGQRFHALN..G..G..PQ..YRF....NEA.....VSFFISV..E....
  38 .---AGTRMVEFEL.FGQPFIAMS..H..P..RT..ETF....NHT.....VSLMVSC..A....
  39 .GPEGSVLVVEFTV.AGQPFMALN..G..G..TP..LPF....NHA.....VSFKIDC..V....
  40 .QETERVMAVEFEL.QGRTFVALN..G..G..AVp.WQF....NEA.....ISMVVNC..K....
  41 .EKEGTVQRSVFSI.AGQDLMAMD..S..GldHA..FTF....SEA.....YSFFIKC..E....
  42 .EKEGTVQRSVFSI.AGQDLMAMD..S..GldHA..FTF....SEA.....YSFFIKC..E....
  43 .GMSGKVLNGEFSL.NGLDFICLD..G..G..PI..FKF....NEA.....VSFTVTC..K....
  44 .GMSGKVLNGEFSL.NGLDFICLD..G..G..PI..FKF....NEA.....VSFTVTC..K....
  45 .----------FIL.NGQKFFSYN..G..G..PN..FQF....NWG.....VSFMISV..E....
  46 .----------FIL.NGQKFFSYN..G..G..PN..FQF....NWG.....VSFMISV..E....
  47 .AKNAKINFASFKL.NNTNFSASD..N..G..FDtnYCF....NEA.....FSLIINC..K....
  48 .ENPENVQHAQFII.NNYMLSCMD..SsfD..HK..FDF....NEG.....ISLVMMT..N....
  49 .GPAGSVKIAEFTL.SDQSYMAIE..A..G..PL..DPF....NHS.....FSIMVEC..D....
  50 .GMSGKIITAEFTL.NGQKYLALD..G..G..PY..FHF....NEA.....ISMTIEC..E....
  51 .GKEGTVIHATFTL.HGQEFMCID..SyvN..HN..FTF....TPA.....MSLYVTC..D....
  52 .GKEGTVIHATFTL.NGQEFMCID..SyvN..HN..FTF....TPA.....MSLYVTC..E....
  53 .GKEGTVIHATFTL.HGQEFMCID..SyvN..HN..FTF....TPA.....XSLYVTC..D....
  54 .GKEGTVIQATFTL.HGQEFMCID..SyvN..HN..FTF....TPA.....MSLYVTC..N....
  55 .GKEGTVIHATFTL.NGQEFMCID..SyvK..HD..FAF....TPA.....MSLYVTC..E....
  56 .ATPEALMFSQFQL.DGQWIFAMD..S..G..VEqdFTF....SEG.....VSLMYEA..H....
  57 .ATPEALMFSQFQL.DGQWIFAMD..S..G..VEqdFTF....SEG.....VSLMYEA..H....
  58 .---------DFTV.AGI----LN..G..G..PA..FKH....NEA.....FSFQIAT..D....
  59 .GDHGTVQHSIFTL.NGQVFMAID..AnsG..TE..LPM....NPA.....ISLFVTV..K....
  60 .GDPGTVQHSIFTL.NGQVFMAID..AnsG..TE..LPM....NPA.....ISLFVTV..K....
  61 .GTPGSVQHSIFTL.NGQVFMAID..AnsG..EE..LPM....NPA.....MSLYVTV..K....
  62 .QTGDVVMSATFAI.SGKEILSFN..G..G..PH..FKF....TPA.....ISFFLSC..Q....
  63 .QTGDVVMSATFAI.SGKEILSFN..G..G..PH..FKF....TPA.....ISFFLSC..Q....
  64 .PQGTSLMTIEFTL.ANQTIIGLN..G..G..PE..FSF....TPAs130aFSIYIDC..E....
  65 .-PSGDAETVNFIL.AGLPFAAIS..A..G..PF..FKF....NPS.....ISLSVAC..S....
  66 .GFENKIMHASFHI.GATTLMASD..G..C..GE..DSH....FDG.....FSLSLTV..P....
  67 .GSSNLVMHVRLEV.GDQVLMGSD..N..C..PP..MPYeg..TKG.....VSVSLNV..D....
  68 .GMEGKILRAVIVI.KGQEIMCMD..SfiQ..HD..FSF....TPS.....MSLFVTC..D....
  69 .DWKDKIMHARLVV.GSFALMASD..N..H..PA..YPYeg..IKG.....CSISLNV..D....
  70 .GPEGSVLKALFRL.GDQSVHCID..ShvR..HA..FDF....TPA.....FSFFVDC..E....
  71 .PFAGKTLTVELAI.SGFKIILIN..A..G..EE..FTP....NPS.....ISFMVNF..Dav6e
  72 .GFENKIMHAAFKV.GDVTILASD..G..C..ND..TDT....FSG.....FSLALTV..P....
  73 .PFAGKTLTVELAI.SGFKIILIN..A..G..EE..FTP....NPS.....ISFMVNF..Dav6e
  74 .QWHDKIMHVCLDL.GDQLLMGSD..S..P..PEh.FET....PQG.....FYVQLGI..D....
  75 .GLEEKIMHASVQM.GSTGWMASD..GhcD..PA..VGP....MSG.....FSLSLTA..D....
  76 .GDIGKVLNATFEI.KGASFMIMDmtN..N..AS..PDF....SWA.....TTTLYFA..D....
  77 .GDIGKVLNATFEI.KGASFMIMDmtN..N..AS..PDF....SWA.....TTTLYFA..D....
  78 .AYTDKIMHGMLETpSGFTLMGAD..T..P..PG..MEY....TPG.....NTFAVSLsgD....
  79 .GDIGKVLNATFEM.KGASFMIMDmtN..N..AS..PNF....SWA.....TTTLYFA..D....
  80 .GWCDKVMHANLQI.GDSQIMASD..Gh.G..PA..LQP....ISG.....ISLSLNT..R....
  81 .ETKNLVLNAALEV.KGSTIMFSD..I..V..PG..MKLvv..GNN.....ISLVVII..N....
  82 .GREKTIMHARMSLpGGSVLMASD..A..P..PEh.VQK....PQG.....FSISLTI..A....
  83 .ELEHLIMNAQFNI.DGIRMQLSD..N..N..PI..FDFqi..GQN.....MTAALIV..E....
  84 vPPGDKVMHAAFRI.GDTLVMASD..G..M..AS..GKAe...FKG.....FSLSVDV..A....
  85 .VEPDWIMHAEFEV.NGIHLMLSD..G..V..VA..KELa...GNN.....MALSLCV..D....
  86 .-------------.---------..-..-..--..---....---.....-------..-....
  87 .DEKGRTMHIHLHI.NGSTLMLGD..A..Y..PE..HGHphkaAQG.....YTLQLHL..D....
  88 .-------------.--FALMASD..N..H..PA..YPYeg..IKG.....CSISLNV..D....
  89 .-------------.--------N..A..G..PQ..FEK....NPS.....ISFLINC..A....


            90       100            110       120       130       140  
            |         |              |         |         |         |  
   1 .DQAETDRLWNAIVDNGGEESA.....CGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAM
   2 .DQDETDRYWNAIVGNGGQESV.....CGWCKDKWGISWQITPIALTKAVTDPDTAAAKRAFDAM
   3 .DQAETDRLWDAIVGNGGQESE.....CGWCKDRWGLSWQITPRALTAAYTDPDRAAAKRAFDAM
   4 .DQAETDRLWNAIVGHGGQESA.....CGWCKDKWGLSWQITPRALMEAINDPDAQAAKRAFDAM
   5 .DQAETDRYWNAIVGNGGQESV.....CGWCKDKWGVSWQITPIALTKAVTDPDTATAKRAFDAM
   6 .DQAETDRYWNAIIGNGGQESE.....CGWCKDKWGLSWQITPIVLINAITHPDPAAAKRAFDAM
   7 .DQAETDRLWNAIVSHGGQESA.....CGWCKDRWGLCWQITPRALLAAITDPDRAAAKRAFDAM
   8 .DQAETDRLWNAIVGNGGQESA.....CGWCKDRWGISWQITPRALTAAICDPDRAAAKRAFDAM
   9 .DQEETDRYWNAIVGNGGEESA.....CGWCKDKWGVSWQITPRVLMDAMAAGG-AEAKRAFDAM
  10 .DQAETDRLWDAIVGNDGEASV.....CGWCRDKWGISWQITPRILIEAIGHPDRAAAKRAFEAM
  11 .DQDEVDHYWTRLTEGGGEDGP.....CGWLKDRFGVSWQVVPRRLEEMFRDPDPARVARANKAM
  12 .DQDEVDHYWNRLTEGGGEGGP.....CGWLKDRYGLSWQVVPAKLIGMIGDADPEKAARTSKAM
  13 .TQEEVDHFWTRLTEDGGEPGP.....CGWLKDKFGVSWQVVPEQLPRLLGDADRAKAGRAMNAM
  14 .DQAETDRLWNAIVDNGGEESA.....CGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAM
  15 .DQAETDRLWNAIVANGGEENV.....CGWCRDKWGLSWQITPRVLTEAIAHPDRAAAKRAFDAM
  16 .NQEETDRYWNAIVGNGGQESA.....CGWCKDKWGISWQITPRVLMEAMAAGG-AEAKRAFEAM
  17 .DQEETDRYWNAIVGNGGEESA.....CGWCKDKWGVSWQITPRVLMDAMAAGG-AEAKRAFDAM
  18 .NQEEVDHFWGNLSAGGPVQAQq....CGWLKDQFGVSWQIVPVAFMHMMTDPDQTKVQRAMQAM
  19 .SQAEIDRYWAQLT-EGGTPWQ.....CGWLQDRFGVSWQIVPDVLGEMLRDPDAAKASRVMAAM
  20 .DQAETDRLWNAIVDNGGEESA.....CGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAM
  21 .DQAETDRLWNAIVDNGGEESA.....CGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAM
  22 .TQEEIDELWEKLSLDGEKQGP.....-AWVKDRYGISWQIVPTVLGELLSDPDTEKSRRVMEAM
  23 .DQEETDRYWNAIVGNGGQESE.....CGWCKDKWGVSWQITPRTLMDALAAGG-EQAKRAFDAM
  24 .DQAQVDSVWNAFIAHGGKEEQ.....CGWLRDRWGVAWQVVPKVMFEFLTSPDKAAAARAMQAM
  25 .TQEETDRLWNAIVDNGGVESA.....CGWCKDKWGLSWQITPRQLTDGMAHPDPVVRKRVFEAM
  26 .DQDEIDRYWARLSEGGDERAQq....CGWLRDRFGVSWQVVPVQMSDLMT-GDPARAERVMAQV
  27 .TQADVDDYWQKLSAGGDETAQq....CGWLKDKYGVSWQIIPRILIELLNHPDAATSQKVTTTM
  28 .DQREIDRYWAALAEGGDERAQq....CGWLRDRFGVSWQVVPVQMPELMA-GDPARAERVMAQV
  29 .TQEEIDHYWERLGAGGDPRAQq....CGWLADQYGLSWQIVPAMVAEWMT-GDPAGAQRAMAAL
  30 .TQEEVDRYWQALS-ARPEAEA.....CGWVKDRWGLSWQIVPLVLPRLLSDPDRAKAGRVMRAM
  31 .TQEEIDHYWERLGAGGDPRAQq....CGWLADQYGLSWQIVPAMVAEWMT-GDPAGVQRAMAAL
  32 .DQAELDRYWNALLDNGGTADA.....CGWLRDRYGVSWQIVPETLIPMMSDRDTVKATRVAAAM
  33 .DQEETDRYWNAIIENGGSENN.....CGWCQDRWGFFWQITPKRLMELTTGSDRDKAKRAFEAM
  34 .DQDEVDYYWDRLS-DGGEESQ.....CGWLKDRFGLSWQIVPDRLFELIGDPDRSRAAAATQAM
  35 .SQEETDRYWNAILENGGIESA.....CGWCKDRWGFSWQITPRILLELTTSSDSAKAQRAFESM
  36 .SQEELDRIWHAFLDNGGQAEH.....CGWLKDRWGLSWQIVPRVLGEMISDANRERAKRVTEAM
  37 .TQGEVDYFWDRLTADGGEESR.....CGWLKDKFGLSWQVIPSALGRYLGDPDRTKANRVMQAM
  38 .DQAELDRYWSALLDNGGTADG.....CGWLRDRFGVSWQIVPDALIPMMADRDTVKAARVAAAM
  39 .DQAEVDRLWDALLAEGGEPVA.....CGWLRDRYGLSWQIVPADALKLFAGSNREGAKRPMQAM
  40 .DQAEVDYYWEKLSKNGDASRQq....SGWLADKYGISWQIVPAAFKEMMCSGDKAGVGRLTAAM
  41 .TQAEIDKYWEKLSFQG-EKQK.....CGWVKDKFGVSWQIIPSILGDYLQDKDPKKSQRVLQAM
  42 .TQAEIDKYWEKLSFQG-EKQK.....CGWVKDKFGVSWQIIPSILGDYLQDKDPKKSQRVLQAM
  43 .NQAEIDDYWSKLS-HVKEAEQ.....CGWCKDKFGISWQIIPENLGQLMAKGD-----KAVQVL
  44 .NQAEIDDYWSKLS-HVKEAEQ.....CGWCKDKFGISWQIIPENLGQLMAKGD-----KAVQVL
  45 .TQKEVDYYWNALLAGGGKESM.....CGWIQDKYGMWWQVTPKILLQLVSHKDRAKAERVTQAM
  46 .TQKEVDYYWNALLAGGGKESM.....CGWIQDKYGMWWQVTPKILLQLVSHKDRAKAERVTQAM
  47 .NQSEIDYYSEKLS-HVPEAEQ.....CGWVKDKYGISWQIIPRSMNEILSSGTKEEIKRVTDAF
  48 .DQKETDHLWNTLIFGGGRESM.....CGWLKDRYGVSWQIVPKRLIELMNDTDPAKSQKVVQAM
  49 .TQAEIDHLWNAFA-EGGTIEQ.....CGWVRDRWGLCWQIVPKQLGQLMKNPDPEKRKRVAEAM
  50 .DQDEIDYFWDKLS-HVKEAEQ.....CGWAKDKFGLSWQIVPYNMRALTGTDA------QIQAM
  51 .TEEEIETAFNKLAEDGAVLMPlg9kkFGWLNDKYGVSWQL------------------------
  52 .TEEEIDTVFHKLAQDGAILMPlg9kkFGWLNDKYGVSWQL------------------------
  53 .TEXEIETAFNKLAEDGAVLMPlg9kkFGWLNDKYGVSWQL------------------------
  54 .TEEEIETAFNKLAEDGAVLMPlg9kkFGWLNDKYGVSWQL------------------------
  55 .TEEEIETVFHKLEQDGSVLMPlg9kkFGWLNDKYGVSWQL------------------------
  56 .GQEELDAIWNALS-AVPEAEA.....CGWLKDKFGVSWQIVPDNMEELMAKPG------AYEKL
  57 .GQEELDAIWNALS-AVPEAEA.....CGWLKDKFGVSWQIVPDNMEELMAKPG------AYEKL
  58 .DQEETDRYWNAIVGNGGQESA.....CGWCKDKWGISWQITPRVLAEAMAAGG-DEAKRAFEAM
  59 .DTIEMERLFNGLKDEGAILMPkt9reFAWVQDKFGVSFQL------------------------
  60 .DTIEMERLFNGLKDEGAILMPkt9reFAWVQDKFGVSFQL------------------------
  61 .DTMEMERLFNGLKNEGAILMPkt9reFAWVQDKFGVSFQL------------------------
  62 .TSKEIEKIWASLSQEGIVLMElq9ekFGWVQDKFGVSWQV------------------------
  63 .TSKEVEKIWASLSQEGIVLMElq9ekFGWVQDKFGVSWQV------------------------
  64 .NQEEIDRLWQQVTAKG-KEWP.....CGWMEDQFGVSWQTGNPELKRYLSDSNPARANEVTKKL
  65 .SRPEVKRLWNAFSEGGTVLMPld9alYGWVQDRYGLSWQL------------------------
  66 .TEAEADRTFAALAEGGQVRMPlt9srFGMLTDRFGISWMI------------------------
  67 .SKAEAKRIFDALSEGGQVGMPlq9aaFGMFTDRFGVPWMV------------------------
  68 .DEQELQDVFTKFSQEGEIRMPid9kqFGWVEDKFGVNWQ-------------------------
  69 .SKAEAERLFNALAEGGSVQMPlg9asFGMFTDRFGVAWMV------------------------
  70 .SNAQIERLAEALSDGGKALMPlg9qrFAWLADRFGVSWQ-------------------------
  71 nAKEHLDAVWEKLHEGGSTLMPvd9eyYGWVQDKYGVSWQL------------------------
  72 .NEPQAHRVFNALAQDGKVVMPla9plYGQVTDKFGVAWMI------------------------
  73 nAKEHLDAVWEKLHEGGSTLMPvd9eyYGWVQDKYGVSWQL------------------------
  74 .EPAEAERIFHALAENGKVKMPie9vrFGMLVDQFGIPWMI------------------------
  75 .DTASAEKYFNALADGGQVMMPfq9kgFGMVVDRFGLMWMV------------------------
  76 .TEDEFDTLFEKLAKEGTVMMGpe9rkVAWVTDKFGITWQL------------------------
  77 .TEDEFDTLFEKLAKEGTVMMGpe9rkVAWVTDKYGITWQL------------------------
  78 .DATELRGYWEKLSAGGSVAVPle9dvFGMCTDRFGVTWMV------------------------
  79 .TEDEFDTLFEKLAKEGTVMMGpe9rkVAWVTDKYGITWQL------------------------
  80 .DPQQARRCYDALLEDGGRVELe10pcFGTLVDRFGVSWMI------------------------
  81 .DIDELKLIFNRLKEKGTVLMElq9kcYGYVVDKFGIEWQL------------------------
  82 .DVADAERKFNALADGGTVTMPfs9kgFGMCVDKFGIPWMV------------------------
  83 .SVEEAQELFNKLSRDAMNIKMp10paYGNVTDKYGMTWQI------------------------
  84 .DEADAERTFKALGDGGQVSMPla9krFGMLVDRFGVMWMV------------------------
  85 .DLDIQLKLFDQLADGGRVMMPlt9srLGKVEDKFGIRWMI------------------------
  86 .--------------NGGKESA.....CGWCKDKWGLSWQITPRALTEAFQDPDRAAAKRAFEAM
  87 .D-GDIDFWWQRAVDAGCEVVTp10drWGQLNDPFGVAW--------------------------
  88 .SKAEAERLFNALAEGGSVQMPlg9asFGMFTDRFGVAWMV------------------------
  89 .SEENVQHYWDLLSEGGMALMEld9kkYGWIKDKYGTNWQL------------------------


           150         
            |         
   1 MTMGRIDIATIEKAFKG
   2 MQMKKIDIAAIEAAYRG
   3 MTMKKIDIAKIEAARRG
   4 MTMGKIDIAAIEAARRG
   5 MQMKKIDIAAIEAARRG
   6 MQMRKIDIATIEAALRG
   7 MTMGKIDIAAIEAARAG
   8 MTMKKIDIATIEAARLG
   9 MDMKKIDVAAIEAARRG
  10 MQMGKIDVAKIAAALEG
  11 MSMRKLDIAALEQAYAG
  12 MEMGKLDIAALEKAYEG
  13 MQMGKIDIAKLEAAAKG
  14 MTMGRIDIATIEKAFKG
  15 MTMRKIDVAAIEAALAG
  16 MTMGKIDVAAIEAARRG
  17 MDMKKIDVAAIEAARRG
  18 FGMKKLDIAELERAFAG
  19 MKMVKLDIAQLEAAYRG
  20 MTMGRIDIATIEKAFKG
  21 MTMGRIDIATIEKAFKG
  22 LQMDKIDIEKLKQAHKG
  23 MSMRKIDVAAIDAARKG
  24 MKMVKLDVAVLRQAFEG
  25 MTMRKIDIAAIERAASG
  26 MTMKKLDLGALQRAAAG
  27 LQMKKIEIDELKR----
  28 LRMKKLDLSVLEQAAAG
  29 LGMKKLDIAALRRAYDG
  30 MEMKKIDIAALEAA---
  31 LGMKKLDIAALRRAYDG
  32 MQMIKLDDATLKAAYAG
  33 MTMNKINIAALEAAV--
  34 YGMRKIVIAELERA---
  35 MTMTKIDIATLEAAV--
  36 LAMVKFDIAALERAH--
  37 MGMRKIVIADLDKAYAG
  38 MQMTKFDVAALQAAYAG
  39 MQMVKLDVGALQRAYEG
  40 MKMKKFDIAELEKAFKG
  41 LQMDKIDIVKLKRAYD-
  42 LQMDKIDIVKLKRAYD-
  43 MKQKKIIIEEF------
  44 MKQKKIIIEEF------
  45 LNMQKIDIAALKA----
  46 LKMQKIDIAALKA----
  47 LKMKKFDIDALEKAKRG
  48 LKMQKIIIADLE-----
  49 LKMVKLDIAGLEAAA--
  50 MKMQKIIIRELEEA---
  51 -----------------
  52 -----------------
  53 -----------------
  54 -----------------
  55 -----------------
  56 LAMKKINIA--------
  57 LAMKKINIA--------
  58 MTMKKIDVAAIEAARRG
  59 -----------------
  60 -----------------
  61 -----------------
  62 -----------------
  63 -----------------
  64 YQMKKIDLNQLKEVY--
  65 -----------------
  66 -----------------
  67 -----------------
  68 -----------------
  69 -----------------
  70 -----------------
  71 -----------------
  72 -----------------
  73 -----------------
  74 -----------------
  75 -----------------
  76 -----------------
  77 -----------------
  78 -----------------
  79 -----------------
  80 -----------------
  81 -----------------
  82 -----------------
  83 -----------------
  84 -----------------
  85 -----------------
  86 MQMGKIDIAKIEAARRG
  87 -----------------
  88 -----------------
  89 -----------------