Best Alignments for T0252

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mkiA/T0252-1mkiA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mkiA/T0252-1mkiA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.8401e-522.4794e-72 e.3.1.2
1i2sA/T0252-1i2sA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1i2sA/T0252-1i2sA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.1179e-043.1314e-07 e.3.1.1
4blmA/T0252-4blmA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4blmA/T0252-4blmA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.7732e-043.8842e-07 1btl e.3.1.1
1iysA/T0252-1iysA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1iysA/T0252-1iysA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.5234e-032.7130e-06 e.3.1.1
1iyoA/T0252-1iyoA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1iyoA/T0252-1iyoA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.1058e-034.2633e-06 e.3.1.1
1hzoA/T0252-1hzoA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hzoA/T0252-1hzoA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.8001e-037.1669e-06 e.3.1.1
1n9bA/T0252-1n9bA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1n9bA/T0252-1n9bA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.9847e-037.6930e-06 e.3.1.1
1m40A/T0252-1m40A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1m40A/T0252-1m40A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.1381e-023.5044e-17 e.3.1.1
1e25A/T0252-1e25A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1e25A/T0252-1e25A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 7.4517e-023.4739e-11 1e25A e.3.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001