Best Alignments for T0251

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1egr/T0251-1egr-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1egr/T0251-1egr-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.5020e-023.1925e-03 1kte c.47.1.1
1fo5A/T0251-1fo5A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fo5A/T0251-1fo5A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.1132e-023.3261e-03 1fo5A c.47.1.1
1qfnA/T0251-1qfnA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1qfnA/T0251-1qfnA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.9882e-017.3344e-02 1qfnA c.47.1.1
1hyuA/T0251-1hyuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hyuA/T0251-1hyuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1862e+005.3469e-01 1hyuA c.3.1.5
c.47.1.2
1t1vA/T0251-1t1vA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1t1vA/T0251-1t1vA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.4098e+001.5479e-01
1j0fA/T0251-1j0fA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1j0fA/T0251-1j0fA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.5907e+006.4621e-01 unknown_sccs

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001