Best Alignments for T0246

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1cnzA/T0246-1cnzA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1cnzA/T0246-1cnzA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.6544e-559.4461e-84 1cnzA c.77.1.1
1iso/T0246-1iso-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1iso/T0246-1iso-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.6752e-461.4314e-70 1iso c.77.1.1
1pb1A/T0246-1pb1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pb1A/T0246-1pb1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9361e-442.6661e-69 c.77.1.1
1lwdA/T0246-1lwdA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lwdA/T0246-1lwdA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.4928e-441.4970e-63 c.77.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001