Best Alignments for T0244

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mp4A/T0244-1mp4A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mp4A/T0244-1mp4A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.7033e-353.3265e-52 c.68.1.6
1lvwA/T0244-1lvwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lvwA/T0244-1lvwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.5801e-341.2176e-50 c.68.1.6
1h5rA/T0244-1h5rA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1h5rA/T0244-1h5rA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.6789e-341.4702e-51 c.68.1.6
1mc3A/T0244-1mc3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mc3A/T0244-1mc3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.0836e-341.8067e-50 c.68.1.6
1fxoA/T0244-1fxoA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fxoA/T0244-1fxoA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.4509e-337.7566e-50 1g0rA c.68.1.6
1h5rB/T0244-1h5rB-t2k-global-adpstyle5.a2m 1h5rB/T0244-1h5rB-t2k-global-adpstyle5.al 1.9961e-281.0980e-37 c.68.1.6
1h5sD/T0244-1h5sD-t2k-global-adpstyle5.a2m 1h5sD/T0244-1h5sD-t2k-global-adpstyle5.al 2.1477e-281.1740e-37 c.68.1.6
1h5sA/T0244-1h5sA-t2k-global-adpstyle5.a2m 1h5sA/T0244-1h5sA-t2k-global-adpstyle5.al 4.6327e-283.0696e-37 c.68.1.6
1mp3A/T0244-1mp3A-t2k-global-adpstyle5.a2m 1mp3A/T0244-1mp3A-t2k-global-adpstyle5.al 7.8172e-284.1381e-37 c.68.1.6
1fxjA/T0244-1fxjA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fxjA/T0244-1fxjA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3139e-272.7844e-40 1fwyA b.81.1.4
c.68.1.5
1mp5A/T0244-1mp5A-t2k-global-adpstyle5.a2m 1mp5A/T0244-1mp5A-t2k-global-adpstyle5.al 1.4088e-279.7833e-37 c.68.1.6
1hv9A/T0244-1hv9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hv9A/T0244-1hv9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.2014e-276.0372e-40 1fwyA b.81.1.4
c.68.1.5
1hm9A/T0244-1hm9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hm9A/T0244-1hm9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0566e-256.1701e-40 b.81.1.4
c.68.1.5
1jykA/T0244-1jykA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1jykA/T0244-1jykA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.8243e-229.4756e-47 c.68.1.13
1vicA/T0244-1vicA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1vicA/T0244-1vicA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 4.5875e-191.8448e-51 c.68.1.13
1h7eA/T0244-1h7eA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1h7eA/T0244-1h7eA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 7.9297e-172.4721e-47 c.68.1.13
1i52A/T0244-1i52A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1i52A/T0244-1i52A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.1093e-155.8364e-44 1i52A c.68.1.13

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001