Best Alignments for T0242

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ixrC/T0242-1ixrC-t2k-global-adpstyle5.a2m 1ixrC/T0242-1ixrC-t2k-global-adpstyle5.al 4.0698e+001.6877e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t2k-global-adpstyle5.a2m 1ixsB/T0242-1ixsB-t2k-global-adpstyle5.al 4.0949e+002.0784e+00 a.4.5.11
c.37.1.20
1ry2A/T0242-1ry2A-t2k-local-adpstyle1.a2m 1ry2A/T0242-1ry2A-t2k-local-adpstyle1.al 5.2635e+005.1429e+00 e.23.1.1
1in5A/1hqcA-T0242-fssp-local-adpstyle5.a2m 1in5A/1hqcA-T0242-fssp-local-adpstyle5.al 1.8028e+014.7406e+00 1hqcA a.4.5.11
c.37.1.20
1in7A/1hqcA-T0242-fssp-local-adpstyle5.a2m 1in7A/1hqcA-T0242-fssp-local-adpstyle5.al 1.8305e+014.8012e+00 1hqcA a.4.5.11
c.37.1.20
1n3yA/T0242-1n3yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1n3yA/T0242-1n3yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0767e+019.0475e+00 c.62.1.1
1g2yA/T0242-1g2yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1g2yA/T0242-1g2yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.6890e+011.5340e+01 unknown_sccs
1otrB/T0242-1otrB-t04-global-adpstyle5.a2m 1otrB/T0242-1otrB-t04-global-adpstyle5.al 2.7280e+012.5839e+01 d.15.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001