Best Alignments for T0242

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1n3yA/T0242-1n3yA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.0767e+015.6464e-03 c.62.1.1
1n3yA/T0242-1n3yA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.0767e+018.6966e-03 c.62.1.1
1n3yA/T0242-1n3yA-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.0767e+013.9997e-01 c.62.1.1
1n3yA/T0242-1n3yA-t2k-global-str2-1.5-adpstyle5.a2m 2.0767e+016.8818e-01 c.62.1.1
1n3yA/T0242-1n3yA-t2k-local-str2-1.5-adpstyle5.a2m 2.0767e+018.4448e-01 c.62.1.1
1ixrC/T0242-1ixrC-t2k-global-adpstyle5.a2m 4.0698e+001.6877e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-t2k-global-adpstyle1.a2m 4.0698e+001.6877e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t2k-global-adpstyle5.a2m 4.0949e+002.0784e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t2k-global-adpstyle1.a2m 4.0949e+002.0784e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-t04-global-adpstyle5.a2m 4.0698e+002.9822e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-t04-global-adpstyle1.a2m 4.0698e+002.9822e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t04-global-adpstyle5.a2m 4.0949e+003.2992e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t04-global-adpstyle1.a2m 4.0949e+003.2992e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-t04-local-adpstyle5.a2m 4.0698e+003.6273e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-t04-local-adpstyle1.a2m 4.0698e+003.6273e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t04-local-adpstyle5.a2m 4.0949e+003.6519e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t04-local-adpstyle1.a2m 4.0949e+003.6519e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-t2k-local-adpstyle1.a2m 4.0698e+003.8914e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-t2k-local-adpstyle5.a2m 4.0698e+003.8914e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-simplesw-adpstyle5.a2m 4.0698e+003.8997e+00 a.4.5.11
c.37.1.20
1ixrC/T0242-1ixrC-simplesw-adpstyle1.a2m 4.0698e+003.8997e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t2k-local-adpstyle1.a2m 4.0949e+003.9176e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-t2k-local-adpstyle5.a2m 4.0949e+003.9176e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-simplesw-adpstyle5.a2m 4.0949e+003.9259e+00 a.4.5.11
c.37.1.20
1ixsB/T0242-1ixsB-simplesw-adpstyle1.a2m 4.0949e+003.9259e+00 a.4.5.11
c.37.1.20
1in5A/1hqcA-T0242-fssp-global-adpstyle5.a2m 1.8028e+014.6947e+00 1hqcA a.4.5.11
c.37.1.20
1in5A/1hqcA-T0242-fssp-local-adpstyle5.a2m 1.8028e+014.7406e+00 1hqcA a.4.5.11
c.37.1.20
1in7A/1hqcA-T0242-fssp-global-adpstyle5.a2m 1.8305e+014.7547e+00 1hqcA a.4.5.11
c.37.1.20
1in7A/1hqcA-T0242-fssp-local-adpstyle5.a2m 1.8305e+014.8012e+00 1hqcA a.4.5.11
c.37.1.20
1in8A/1hqcA-T0242-fssp-global-adpstyle5.a2m 1.8579e+014.8139e+00 1hqcA a.4.5.11
c.37.1.20
1j7kA/1hqcA-T0242-fssp-global-adpstyle5.a2m 1.8657e+014.8308e+00 1hqcA a.4.5.11
c.37.1.20
1in8A/1hqcA-T0242-fssp-local-adpstyle5.a2m 1.8579e+014.8610e+00 1hqcA a.4.5.11
c.37.1.20
1j7kA/1hqcA-T0242-fssp-local-adpstyle5.a2m 1.8657e+014.8780e+00 1hqcA a.4.5.11
c.37.1.20
1ry2A/T0242-1ry2A-t2k-local-adpstyle1.a2m 5.2635e+005.1429e+00 e.23.1.1
1ry2A/T0242-1ry2A-t2k-local-adpstyle5.a2m 5.2635e+005.1429e+00 e.23.1.1
1ry2A/T0242-1ry2A-t04-global-adpstyle1.a2m 5.2635e+005.7079e+00 e.23.1.1
1ry2A/T0242-1ry2A-t04-global-adpstyle5.a2m 5.2635e+005.7079e+00 e.23.1.1
1ry2A/T0242-1ry2A-simplesw-adpstyle5.a2m 5.2635e+005.8771e+00 e.23.1.1
1ry2A/T0242-1ry2A-simplesw-adpstyle1.a2m 5.2635e+005.8771e+00 e.23.1.1
1ry2A/T0242-1ry2A-t04-local-adpstyle5.a2m 5.2635e+007.2315e+00 e.23.1.1
1ry2A/T0242-1ry2A-t04-local-adpstyle1.a2m 5.2635e+007.2315e+00 e.23.1.1
1in5A/T0242-1in5A-t2k-global-adpstyle1.a2m 1.8028e+017.7750e+00 1hqcA a.4.5.11
c.37.1.20
1in5A/T0242-1in5A-t2k-global-adpstyle5.a2m 1.8028e+017.7750e+00 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-t2k-global-adpstyle1.a2m 1.8657e+017.7813e+00 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-t2k-global-adpstyle5.a2m 1.8657e+017.7813e+00 1hqcA a.4.5.11
c.37.1.20
1in7A/T0242-1in7A-t2k-global-adpstyle1.a2m 1.8305e+017.8744e+00 1hqcA a.4.5.11
c.37.1.20
1in7A/T0242-1in7A-t2k-global-adpstyle5.a2m 1.8305e+017.8744e+00 1hqcA a.4.5.11
c.37.1.20
1in8A/T0242-1in8A-t2k-global-adpstyle5.a2m 1.8579e+017.9725e+00 1hqcA a.4.5.11
c.37.1.20
1in8A/T0242-1in8A-t2k-global-adpstyle1.a2m 1.8579e+017.9725e+00 1hqcA a.4.5.11
c.37.1.20
1n3yA/T0242-1n3yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.0767e+019.0475e+00 c.62.1.1
1in5A/T0242-1in5A-t04-global-adpstyle5.a2m 1.8028e+019.7532e+00 1hqcA a.4.5.11
c.37.1.20
1in5A/T0242-1in5A-t04-global-adpstyle1.a2m 1.8028e+019.7532e+00 1hqcA a.4.5.11
c.37.1.20
1in7A/T0242-1in7A-t04-global-adpstyle5.a2m 1.8305e+019.8743e+00 1hqcA a.4.5.11
c.37.1.20
1in7A/T0242-1in7A-t04-global-adpstyle1.a2m 1.8305e+019.8743e+00 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-t04-global-adpstyle5.a2m 1.8657e+019.8861e+00 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-t04-global-adpstyle1.a2m 1.8657e+019.8861e+00 1hqcA a.4.5.11
c.37.1.20
1in8A/T0242-1in8A-t04-global-adpstyle5.a2m 1.8579e+011.0059e+01 1hqcA a.4.5.11
c.37.1.20
1in8A/T0242-1in8A-t04-global-adpstyle1.a2m 1.8579e+011.0059e+01 1hqcA a.4.5.11
c.37.1.20
1ry2A/T0242-1ry2A-t2k-global-adpstyle1.a2m 5.2635e+001.0183e+01 e.23.1.1
1ry2A/T0242-1ry2A-t2k-global-adpstyle5.a2m 5.2635e+001.0183e+01 e.23.1.1
1g2yA/T0242-1g2yA-t04-global-str2-1.5-adpstyle5.a2m 2.6890e+011.1234e+01 unknown_sccs
1n3yA/T0242-1n3yA-t04-local-str2-1.5-adpstyle5.a2m 2.0767e+011.1402e+01 c.62.1.1
1g2yA/T0242-1g2yA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.6890e+011.3127e+01 unknown_sccs
1n3yA/T0242-1n3yA-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.0767e+011.4688e+01 c.62.1.1
1g2yA/T0242-1g2yA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.6890e+011.5340e+01 unknown_sccs
1in5A/T0242-1in5A-t04-local-adpstyle5.a2m 1.8028e+011.7284e+01 1hqcA a.4.5.11
c.37.1.20
1in5A/T0242-1in5A-t04-local-adpstyle1.a2m 1.8028e+011.7284e+01 1hqcA a.4.5.11
c.37.1.20
1in7A/T0242-1in7A-t04-local-adpstyle5.a2m 1.8305e+011.7668e+01 1hqcA a.4.5.11
c.37.1.20
1in7A/T0242-1in7A-t04-local-adpstyle1.a2m 1.8305e+011.7668e+01 1hqcA a.4.5.11
c.37.1.20
1g2yA/T0242-1g2yA-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.6890e+011.7875e+01 unknown_sccs
1in8A/T0242-1in8A-t04-local-adpstyle5.a2m 1.8579e+011.7928e+01 1hqcA a.4.5.11
c.37.1.20
1in8A/T0242-1in8A-t04-local-adpstyle1.a2m 1.8579e+011.7928e+01 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-t04-local-adpstyle5.a2m 1.8657e+011.8050e+01 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-t04-local-adpstyle1.a2m 1.8657e+011.8050e+01 1hqcA a.4.5.11
c.37.1.20
1in5A/T0242-1in5A-t2k-local-adpstyle1.a2m 1.8028e+011.9342e+01 1hqcA a.4.5.11
c.37.1.20
1in5A/T0242-1in5A-t2k-local-adpstyle5.a2m 1.8028e+011.9342e+01 1hqcA a.4.5.11
c.37.1.20
1n3yA/T0242-1n3yA-t2k-global-adpstyle5.a2m 2.0767e+011.9515e+01 c.62.1.1
1n3yA/T0242-1n3yA-t2k-global-adpstyle1.a2m 2.0767e+011.9515e+01 c.62.1.1
1in7A/T0242-1in7A-t2k-local-adpstyle1.a2m 1.8305e+011.9649e+01 1hqcA a.4.5.11
c.37.1.20
1in7A/T0242-1in7A-t2k-local-adpstyle5.a2m 1.8305e+011.9649e+01 1hqcA a.4.5.11
c.37.1.20
1g2yA/T0242-1g2yA-t04-local-str2-1.5-adpstyle5.a2m 2.6890e+011.9902e+01 unknown_sccs
1in8A/T0242-1in8A-t2k-local-adpstyle1.a2m 1.8579e+011.9976e+01 1hqcA a.4.5.11
c.37.1.20
1in8A/T0242-1in8A-t2k-local-adpstyle5.a2m 1.8579e+011.9976e+01 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-t2k-local-adpstyle5.a2m 1.8657e+012.0057e+01 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-t2k-local-adpstyle1.a2m 1.8657e+012.0057e+01 1hqcA a.4.5.11
c.37.1.20
1g2yA/T0242-1g2yA-t2k-global-str2-1.5-adpstyle5.a2m 2.6890e+012.0468e+01 unknown_sccs
1n3yA/T0242-1n3yA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.0767e+012.3279e+01 c.62.1.1
1g2yA/T0242-1g2yA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.6890e+012.3571e+01 unknown_sccs
1otrB/T0242-1otrB-t04-global-adpstyle5.a2m 2.7280e+012.5839e+01 d.15.1.1
1otrB/T0242-1otrB-t04-global-adpstyle1.a2m 2.7280e+012.5839e+01 d.15.1.1
1n3yA/T0242-1n3yA-t04-global-str2-1.5-adpstyle5.a2m 2.0767e+012.6193e+01 c.62.1.1
1otrB/T0242-1otrB-simplesw-adpstyle5.a2m 2.7280e+012.8131e+01 d.15.1.1
1otrB/T0242-1otrB-simplesw-adpstyle1.a2m 2.7280e+012.8131e+01 d.15.1.1
1otrB/T0242-1otrB-t2k-global-adpstyle5.a2m 2.7280e+012.8216e+01 d.15.1.1
1otrB/T0242-1otrB-t2k-global-adpstyle1.a2m 2.7280e+012.8216e+01 d.15.1.1
1otrB/T0242-1otrB-t2k-local-adpstyle5.a2m 2.7280e+013.0067e+01 d.15.1.1
1otrB/T0242-1otrB-t2k-local-adpstyle1.a2m 2.7280e+013.0067e+01 d.15.1.1
1g2yA/T0242-1g2yA-t2k-local-adpstyle1.a2m 2.6890e+013.0157e+01 unknown_sccs
1g2yA/T0242-1g2yA-t2k-local-adpstyle5.a2m 2.6890e+013.0157e+01 unknown_sccs
1n3yA/1n3yA-T0242-t2k-global-adpstyle1.a2m 2.0767e+013.0729e+01 c.62.1.1
1n3yA/1n3yA-T0242-t2k-global-adpstyle5.a2m 2.0767e+013.0729e+01 c.62.1.1
1n3yA/T0242-1n3yA-t2k-local-adpstyle1.a2m 2.0767e+013.0937e+01 c.62.1.1
1n3yA/T0242-1n3yA-t2k-local-adpstyle5.a2m 2.0767e+013.0937e+01 c.62.1.1
1otrB/T0242-1otrB-t04-local-adpstyle1.a2m 2.7280e+013.1750e+01 d.15.1.1
1otrB/T0242-1otrB-t04-local-adpstyle5.a2m 2.7280e+013.1750e+01 d.15.1.1
1g2yA/T0242-1g2yA-t2k-global-adpstyle5.a2m 2.6890e+013.2740e+01 unknown_sccs
1g2yA/T0242-1g2yA-t2k-global-adpstyle1.a2m 2.6890e+013.2740e+01 unknown_sccs
1n3yA/1n3yA-T0242-t04-global-adpstyle5.a2m 2.0767e+013.3424e+01 c.62.1.1
1n3yA/1n3yA-T0242-t04-global-adpstyle1.a2m 2.0767e+013.3424e+01 c.62.1.1
1in5A/T0242-1in5A-simplesw-adpstyle1.a2m 1.8028e+013.6293e+01 1hqcA a.4.5.11
c.37.1.20
1in5A/T0242-1in5A-simplesw-adpstyle5.a2m 1.8028e+013.6293e+01 1hqcA a.4.5.11
c.37.1.20
1n3yA/T0242-1n3yA-t04-global-adpstyle5.a2m 2.0767e+013.6378e+01 c.62.1.1
1n3yA/T0242-1n3yA-t04-global-adpstyle1.a2m 2.0767e+013.6378e+01 c.62.1.1
1in7A/T0242-1in7A-simplesw-adpstyle5.a2m 1.8305e+013.6808e+01 1hqcA a.4.5.11
c.37.1.20
1in7A/T0242-1in7A-simplesw-adpstyle1.a2m 1.8305e+013.6808e+01 1hqcA a.4.5.11
c.37.1.20
1n3yA/1n3yA-T0242-t2k-local-adpstyle1.a2m 2.0767e+013.6876e+01 c.62.1.1
1n3yA/1n3yA-T0242-t2k-local-adpstyle5.a2m 2.0767e+013.6876e+01 c.62.1.1
1g2yA/T0242-1g2yA-t2k-local-str2-1.5-adpstyle5.a2m 2.6890e+013.7017e+01 unknown_sccs
1in8A/T0242-1in8A-simplesw-adpstyle1.a2m 1.8579e+013.7419e+01 1hqcA a.4.5.11
c.37.1.20
1in8A/T0242-1in8A-simplesw-adpstyle5.a2m 1.8579e+013.7419e+01 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-simplesw-adpstyle5.a2m 1.8657e+013.7448e+01 1hqcA a.4.5.11
c.37.1.20
1j7kA/T0242-1j7kA-simplesw-adpstyle1.a2m 1.8657e+013.7448e+01 1hqcA a.4.5.11
c.37.1.20
1n3yA/T0242-1n3yA-simplesw-adpstyle1.a2m 2.0767e+013.7672e+01 c.62.1.1
1n3yA/T0242-1n3yA-simplesw-adpstyle5.a2m 2.0767e+013.7672e+01 c.62.1.1
1n3yA/T0242-1n3yA-t04-local-adpstyle5.a2m 2.0767e+013.7947e+01 c.62.1.1
1n3yA/T0242-1n3yA-t04-local-adpstyle1.a2m 2.0767e+013.7947e+01 c.62.1.1
1g2yA/T0242-1g2yA-t04-global-adpstyle1.a2m 2.6890e+013.8228e+01 unknown_sccs
1g2yA/T0242-1g2yA-t04-global-adpstyle5.a2m 2.6890e+013.8228e+01 unknown_sccs
1g2yA/T0242-1g2yA-t04-local-adpstyle1.a2m 2.6890e+014.1811e+01 unknown_sccs
1g2yA/T0242-1g2yA-t04-local-adpstyle5.a2m 2.6890e+014.1811e+01 unknown_sccs
1n3yA/T0242-1n3yA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.0767e+014.9060e+01 c.62.1.1
1g2yA/1g2yA-T0242-t2k-local-adpstyle1.a2m 2.6890e+015.0989e+01 unknown_sccs
1g2yA/1g2yA-T0242-t04-local-adpstyle1.a2m 2.6890e+015.0989e+01 unknown_sccs
1g2yA/1g2yA-T0242-t04-local-adpstyle5.a2m 2.6890e+015.0989e+01 unknown_sccs
1g2yA/1g2yA-T0242-t2k-local-adpstyle5.a2m 2.6890e+015.0989e+01 unknown_sccs
1n3yA/1n3yA-T0242-t04-local-adpstyle5.a2m 2.0767e+015.1211e+01 c.62.1.1
1n3yA/1n3yA-T0242-t04-local-adpstyle1.a2m 2.0767e+015.1211e+01 c.62.1.1
1g2yA/T0242-1g2yA-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.6890e+015.5190e+01 unknown_sccs
1g2yA/T0242-1g2yA-simplesw-adpstyle5.a2m 2.6890e+015.6963e+01 unknown_sccs
1g2yA/T0242-1g2yA-simplesw-adpstyle1.a2m 2.6890e+015.6963e+01 unknown_sccs
1n3yA/T0242-1n3yA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.0767e+015.7317e+01 c.62.1.1
1g2yA/T0242-1g2yA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.6890e+016.1289e+01 unknown_sccs
1g2yA/T0242-1g2yA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.6890e+016.6941e+01 unknown_sccs
1g2yA/1g2yA-T0242-t04-global-adpstyle5.a2m 2.6890e+016.7319e+01 unknown_sccs
1g2yA/1g2yA-T0242-t2k-global-adpstyle1.a2m 2.6890e+016.7319e+01 unknown_sccs
1g2yA/1g2yA-T0242-t04-global-adpstyle1.a2m 2.6890e+016.7319e+01 unknown_sccs
1g2yA/1g2yA-T0242-t2k-global-adpstyle5.a2m 2.6890e+016.7319e+01 unknown_sccs
1g2yA/T0242-1g2yA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.6890e+017.2037e+01 unknown_sccs

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001