Best Alignments for T0241

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1s1dA/T0241-1s1dA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.1109e+011.0886e+00 unknown_sccs
1e49P/2fua-T0241-fssp-global-adpstyle5.a2m 1.4795e+012.0069e+00 2fua c.74.1.1
1s1dA/T0241-1s1dA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.1109e+013.0783e+00 unknown_sccs
1e49P/T0241-1e49P-t04-global-adpstyle1.a2m 1.4795e+013.9099e+00 2fua c.74.1.1
1e49P/T0241-1e49P-t04-global-adpstyle5.a2m 1.4795e+013.9099e+00 2fua c.74.1.1
1e49P/T0241-1e49P-t2k-global-adpstyle5.a2m 1.4795e+015.0060e+00 2fua c.74.1.1
1e49P/T0241-1e49P-t2k-global-adpstyle1.a2m 1.4795e+015.0060e+00 2fua c.74.1.1
1e49P/2fua-T0241-fssp-local-adpstyle5.a2m 1.4795e+015.2377e+00 2fua c.74.1.1
1s1dA/T0241-1s1dA-t04-local-str2-1.5-adpstyle5.a2m 2.1109e+016.9156e+00 unknown_sccs
1bssA/T0241-1bssA-t2k-global-adpstyle5.a2m 3.9993e+018.9958e+00 1rvaA c.52.1.2
1bssA/T0241-1bssA-t2k-global-adpstyle1.a2m 3.9993e+018.9958e+00 1rvaA c.52.1.2
1skoA/T0241-1skoA-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.2030e+019.6817e+00
1pboA/1obpA-T0241-fssp-local-adpstyle5.a2m 3.7059e+011.1230e+01 1obpA b.60.1.1
1bssA/1rvaA-T0241-fssp-global-adpstyle5.a2m 3.9993e+011.1394e+01 1rvaA c.52.1.2
1bssA/1rvaA-T0241-fssp-local-adpstyle5.a2m 3.9993e+011.1552e+01 1rvaA c.52.1.2
1azzA/5ptp-T0241-fssp-local-adpstyle5.a2m 3.7995e+011.2090e+01 5ptp b.47.1.2
1pboA/1obpA-T0241-fssp-global-adpstyle5.a2m 3.7059e+011.2147e+01 1obpA b.60.1.1
1s1dA/T0241-1s1dA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.1109e+011.2693e+01 unknown_sccs
1s1dA/T0241-1s1dA-t04-global-adpstyle5.a2m 2.1109e+011.2901e+01 unknown_sccs
1s1dA/T0241-1s1dA-t04-global-adpstyle1.a2m 2.1109e+011.2901e+01 unknown_sccs
1azzA/5ptp-T0241-fssp-global-adpstyle5.a2m 3.7995e+011.3006e+01 5ptp b.47.1.2
1e49P/T0241-1e49P-t04-local-adpstyle1.a2m 1.4795e+011.3281e+01 2fua c.74.1.1
1e49P/T0241-1e49P-t04-local-adpstyle5.a2m 1.4795e+011.3281e+01 2fua c.74.1.1
1skoA/T0241-1skoA-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.2030e+011.3298e+01
1bssA/T0241-1bssA-t04-global-adpstyle1.a2m 3.9993e+011.3642e+01 1rvaA c.52.1.2
1bssA/T0241-1bssA-t04-global-adpstyle5.a2m 3.9993e+011.3642e+01 1rvaA c.52.1.2
1pboA/T0241-1pboA-t2k-global-adpstyle1.a2m 3.7059e+011.3676e+01 1obpA b.60.1.1
1pboA/T0241-1pboA-t2k-global-adpstyle5.a2m 3.7059e+011.3676e+01 1obpA b.60.1.1
1q26A/T0241-1q26A-t2k-global-adpstyle1.a2m 2.4857e+011.3912e+01 c.1.21.1
1q26A/T0241-1q26A-t2k-global-adpstyle5.a2m 2.4857e+011.3912e+01 c.1.21.1
1q26A/T0241-1q26A-t04-global-adpstyle5.a2m 2.4857e+011.4427e+01 c.1.21.1
1q26A/T0241-1q26A-t04-global-adpstyle1.a2m 2.4857e+011.4427e+01 c.1.21.1
1g85A/T0241-1g85A-t2k-global-adpstyle1.a2m 3.7198e+011.4653e+01 b.60.1.1
1g85A/T0241-1g85A-t2k-global-adpstyle5.a2m 3.7198e+011.4653e+01 b.60.1.1
1e49P/T0241-1e49P-t2k-local-adpstyle1.a2m 1.4795e+011.4728e+01 2fua c.74.1.1
1e49P/T0241-1e49P-t2k-local-adpstyle5.a2m 1.4795e+011.4728e+01 2fua c.74.1.1
1djqA/2tmdA-T0241-fssp-local-adpstyle5.a2m 5.1235e+011.5014e+01 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1djqA/2tmdA-T0241-fssp-global-adpstyle5.a2m 5.1235e+011.5037e+01 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1s1dA/T0241-1s1dA-t04-local-adpstyle5.a2m 2.1109e+011.5876e+01 unknown_sccs
1s1dA/T0241-1s1dA-t04-local-adpstyle1.a2m 2.1109e+011.5876e+01 unknown_sccs
1s1dA/T0241-1s1dA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2.1109e+011.6708e+01 unknown_sccs
1s1dA/T0241-1s1dA-t2k-local-adpstyle5.a2m 2.1109e+011.7164e+01 unknown_sccs
1s1dA/T0241-1s1dA-t2k-local-adpstyle1.a2m 2.1109e+011.7164e+01 unknown_sccs
1s1dA/T0241-1s1dA-t2k-global-adpstyle5.a2m 2.1109e+011.7793e+01 unknown_sccs
1s1dA/T0241-1s1dA-t2k-global-adpstyle1.a2m 2.1109e+011.7793e+01 unknown_sccs
1pboA/T0241-1pboA-t04-global-adpstyle5.a2m 3.7059e+011.9588e+01 1obpA b.60.1.1
1pboA/T0241-1pboA-t04-global-adpstyle1.a2m 3.7059e+011.9588e+01 1obpA b.60.1.1
1s1dA/T0241-1s1dA-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.1109e+011.9593e+01 unknown_sccs
1skoA/T0241-1skoA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.2030e+012.0159e+01
1g85A/T0241-1g85A-t04-global-adpstyle5.a2m 3.7198e+012.0325e+01 b.60.1.1
1g85A/T0241-1g85A-t04-global-adpstyle1.a2m 3.7198e+012.0325e+01 b.60.1.1
1q26A/T0241-1q26A-t04-local-adpstyle1.a2m 2.4857e+012.0930e+01 c.1.21.1
1q26A/T0241-1q26A-t04-local-adpstyle5.a2m 2.4857e+012.0930e+01 c.1.21.1
1skoA/T0241-1skoA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.2030e+012.4880e+01
1skoA/1skoA-T0241-t04-global-adpstyle5.a2m 5.2030e+012.5808e+01
1skoA/1skoA-T0241-t04-global-adpstyle1.a2m 5.2030e+012.5808e+01
1q26A/T0241-1q26A-t2k-local-adpstyle5.a2m 2.4857e+012.5830e+01 c.1.21.1
1q26A/T0241-1q26A-t2k-local-adpstyle1.a2m 2.4857e+012.5830e+01 c.1.21.1
1skoA/1skoA-T0241-t2k-global-adpstyle5.a2m 5.2030e+012.8811e+01
1skoA/1skoA-T0241-t2k-global-adpstyle1.a2m 5.2030e+012.8811e+01
1q26A/T0241-1q26A-simplesw-adpstyle1.a2m 2.4857e+013.3502e+01 c.1.21.1
1q26A/T0241-1q26A-simplesw-adpstyle5.a2m 2.4857e+013.3502e+01 c.1.21.1
1s1dA/1s1dA-T0241-t2k-global-adpstyle1.a2m 2.1109e+013.6178e+01 unknown_sccs
1s1dA/1s1dA-T0241-t2k-global-adpstyle5.a2m 2.1109e+013.6178e+01 unknown_sccs
1jtzX/T0241-1jtzX-t2k-local-adpstyle5.a2m 3.5066e+013.7410e+01 b.22.1.1
1jtzX/T0241-1jtzX-t2k-local-adpstyle1.a2m 3.5066e+013.7410e+01 b.22.1.1
1e49P/T0241-1e49P-simplesw-adpstyle5.a2m 1.4795e+013.7989e+01 2fua c.74.1.1
1e49P/T0241-1e49P-simplesw-adpstyle1.a2m 1.4795e+013.7989e+01 2fua c.74.1.1
1azzA/T0241-1azzA-t04-local-adpstyle1.a2m 3.7995e+013.7996e+01 5ptp b.47.1.2
1azzA/T0241-1azzA-t04-local-adpstyle5.a2m 3.7995e+013.7996e+01 5ptp b.47.1.2
1skoA/1skoA-T0241-t2k-local-adpstyle1.a2m 5.2030e+013.8091e+01
1skoA/1skoA-T0241-t2k-local-adpstyle5.a2m 5.2030e+013.8091e+01
1skoA/1skoA-T0241-t04-local-adpstyle1.a2m 5.2030e+013.8122e+01
1skoA/1skoA-T0241-t04-local-adpstyle5.a2m 5.2030e+013.8122e+01
1s1dA/T0241-1s1dA-t04-global-str2-1.5-adpstyle5.a2m 2.1109e+013.8316e+01 unknown_sccs
1pboA/T0241-1pboA-t2k-local-adpstyle1.a2m 3.7059e+013.9699e+01 1obpA b.60.1.1
1pboA/T0241-1pboA-t2k-local-adpstyle5.a2m 3.7059e+013.9699e+01 1obpA b.60.1.1
1g85A/T0241-1g85A-t2k-local-adpstyle1.a2m 3.7198e+013.9870e+01 b.60.1.1
1g85A/T0241-1g85A-t2k-local-adpstyle5.a2m 3.7198e+013.9870e+01 b.60.1.1
1pboA/T0241-1pboA-t04-local-adpstyle5.a2m 3.7059e+014.0068e+01 1obpA b.60.1.1
1pboA/T0241-1pboA-t04-local-adpstyle1.a2m 3.7059e+014.0068e+01 1obpA b.60.1.1
1s1dA/T0241-1s1dA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.1109e+014.0113e+01 unknown_sccs
1g85A/T0241-1g85A-t04-local-adpstyle1.a2m 3.7198e+014.0306e+01 b.60.1.1
1g85A/T0241-1g85A-t04-local-adpstyle5.a2m 3.7198e+014.0306e+01 b.60.1.1
1azzA/T0241-1azzA-t2k-local-adpstyle5.a2m 3.7995e+014.0782e+01 5ptp b.47.1.2
1azzA/T0241-1azzA-t2k-local-adpstyle1.a2m 3.7995e+014.0782e+01 5ptp b.47.1.2
1jtzX/T0241-1jtzX-t04-local-adpstyle1.a2m 3.5066e+014.2865e+01 b.22.1.1
1jtzX/T0241-1jtzX-t04-local-adpstyle5.a2m 3.5066e+014.2865e+01 b.22.1.1
1bssA/T0241-1bssA-t2k-local-adpstyle5.a2m 3.9993e+014.3094e+01 1rvaA c.52.1.2
1bssA/T0241-1bssA-t2k-local-adpstyle1.a2m 3.9993e+014.3094e+01 1rvaA c.52.1.2
1s1dA/T0241-1s1dA-t2k-local-str2-1.5-adpstyle5.a2m 2.1109e+014.3693e+01 unknown_sccs
1s1dA/1s1dA-T0241-t2k-local-adpstyle5.a2m 2.1109e+014.5071e+01 unknown_sccs
1s1dA/1s1dA-T0241-t2k-local-adpstyle1.a2m 2.1109e+014.5071e+01 unknown_sccs
1bssA/T0241-1bssA-t04-local-adpstyle5.a2m 3.9993e+014.5436e+01 1rvaA c.52.1.2
1bssA/T0241-1bssA-t04-local-adpstyle1.a2m 3.9993e+014.5436e+01 1rvaA c.52.1.2
1s1dA/1s1dA-T0241-t04-local-adpstyle1.a2m 2.1109e+014.5688e+01 unknown_sccs
1s1dA/1s1dA-T0241-t04-local-adpstyle5.a2m 2.1109e+014.5688e+01 unknown_sccs
1s1dA/T0241-1s1dA-simplesw-adpstyle5.a2m 2.1109e+014.7556e+01 unknown_sccs
1s1dA/T0241-1s1dA-simplesw-adpstyle1.a2m 2.1109e+014.7556e+01 unknown_sccs
1s1dA/1s1dA-T0241-t04-global-adpstyle5.a2m 2.1109e+014.7614e+01 unknown_sccs
1s1dA/1s1dA-T0241-t04-global-adpstyle1.a2m 2.1109e+014.7614e+01 unknown_sccs
1s1dA/T0241-1s1dA-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.1109e+015.0093e+01 unknown_sccs
1jtzX/T0241-1jtzX-t04-global-adpstyle1.a2m 3.5066e+015.0396e+01 b.22.1.1
1jtzX/T0241-1jtzX-t04-global-adpstyle5.a2m 3.5066e+015.0396e+01 b.22.1.1
1djqA/T0241-1djqA-t04-local-adpstyle5.a2m 5.1235e+015.1460e+01 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1djqA/T0241-1djqA-t04-local-adpstyle1.a2m 5.1235e+015.1460e+01 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1bssA/1bssA-T0241-t2k-local-adpstyle1.a2m 3.9993e+015.4353e+01 1rvaA c.52.1.2
1bssA/1bssA-T0241-t2k-local-adpstyle5.a2m 3.9993e+015.4353e+01 1rvaA c.52.1.2
1djqA/T0241-1djqA-t2k-local-adpstyle1.a2m 5.1235e+015.6143e+01 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1djqA/T0241-1djqA-t2k-local-adpstyle5.a2m 5.1235e+015.6143e+01 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1s1dA/T0241-1s1dA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.1109e+015.8353e+01 unknown_sccs
1g85A/T0241-1g85A-simplesw-adpstyle1.a2m 3.7198e+015.8896e+01 b.60.1.1
1g85A/T0241-1g85A-simplesw-adpstyle5.a2m 3.7198e+015.8896e+01 b.60.1.1
1s1dA/T0241-1s1dA-t2k-global-str2-1.5-adpstyle5.a2m 2.1109e+015.8937e+01 unknown_sccs
1pboA/T0241-1pboA-simplesw-adpstyle1.a2m 3.7059e+015.9058e+01 1obpA b.60.1.1
1pboA/T0241-1pboA-simplesw-adpstyle5.a2m 3.7059e+015.9058e+01 1obpA b.60.1.1
1jtzX/T0241-1jtzX-t2k-global-adpstyle5.a2m 3.5066e+016.2274e+01 b.22.1.1
1jtzX/T0241-1jtzX-t2k-global-adpstyle1.a2m 3.5066e+016.2274e+01 b.22.1.1
1skoA/T0241-1skoA-t04-global-adpstyle1.a2m 5.2030e+016.7588e+01
1skoA/T0241-1skoA-t04-global-adpstyle5.a2m 5.2030e+016.7588e+01
1skoA/T0241-1skoA-t2k-local-str2-1.5-adpstyle5.a2m 5.2030e+018.0145e+01
1jtzX/T0241-1jtzX-simplesw-adpstyle1.a2m 3.5066e+018.5810e+01 b.22.1.1
1jtzX/T0241-1jtzX-simplesw-adpstyle5.a2m 3.5066e+018.5810e+01 b.22.1.1
1bssA/T0241-1bssA-simplesw-adpstyle1.a2m 3.9993e+018.8637e+01 1rvaA c.52.1.2
1bssA/T0241-1bssA-simplesw-adpstyle5.a2m 3.9993e+018.8637e+01 1rvaA c.52.1.2
1azzA/T0241-1azzA-t04-global-adpstyle1.a2m 3.7995e+019.0197e+01 5ptp b.47.1.2
1azzA/T0241-1azzA-t04-global-adpstyle5.a2m 3.7995e+019.0197e+01 5ptp b.47.1.2
1skoA/T0241-1skoA-t2k-global-str2-1.5-adpstyle5.a2m 5.2030e+019.0699e+01
1azzA/T0241-1azzA-t2k-global-adpstyle1.a2m 3.7995e+019.2960e+01 5ptp b.47.1.2
1azzA/T0241-1azzA-t2k-global-adpstyle5.a2m 3.7995e+019.2960e+01 5ptp b.47.1.2
1azzA/T0241-1azzA-simplesw-adpstyle5.a2m 3.7995e+019.6120e+01 5ptp b.47.1.2
1azzA/T0241-1azzA-simplesw-adpstyle1.a2m 3.7995e+019.6120e+01 5ptp b.47.1.2
1djqA/T0241-1djqA-simplesw-adpstyle1.a2m 5.1235e+019.6236e+01 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1djqA/T0241-1djqA-simplesw-adpstyle5.a2m 5.1235e+019.6236e+01 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1bssA/1bssA-T0241-t2k-global-adpstyle5.a2m 3.9993e+019.7273e+01 1rvaA c.52.1.2
1bssA/1bssA-T0241-t2k-global-adpstyle1.a2m 3.9993e+019.7273e+01 1rvaA c.52.1.2
1skoA/T0241-1skoA-t04-local-str2-1.5-adpstyle5.a2m 5.2030e+011.0073e+02
1skoA/T0241-1skoA-t04-local-adpstyle1.a2m 5.2030e+011.0288e+02
1skoA/T0241-1skoA-t04-local-adpstyle5.a2m 5.2030e+011.0288e+02
1skoA/T0241-1skoA-t2k-local-adpstyle5.a2m 5.2030e+011.1279e+02
1skoA/T0241-1skoA-t2k-local-adpstyle1.a2m 5.2030e+011.1279e+02
1skoA/T0241-1skoA-t04-global-str2-1.5-adpstyle5.a2m 5.2030e+011.1431e+02
1skoA/T0241-1skoA-t2k-global-adpstyle5.a2m 5.2030e+011.1747e+02
1skoA/T0241-1skoA-t2k-global-adpstyle1.a2m 5.2030e+011.1747e+02
1skoA/T0241-1skoA-simplesw-adpstyle5.a2m 5.2030e+011.2002e+02
1skoA/T0241-1skoA-simplesw-adpstyle1.a2m 5.2030e+011.2002e+02
1djqA/T0241-1djqA-t04-global-adpstyle1.a2m 5.1235e+011.2340e+02 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1djqA/T0241-1djqA-t2k-global-adpstyle5.a2m 5.1235e+011.2340e+02 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1djqA/T0241-1djqA-t2k-global-adpstyle1.a2m 5.1235e+011.2340e+02 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1djqA/T0241-1djqA-t04-global-adpstyle5.a2m 5.1235e+011.2340e+02 2tmdA c.4.1.1
c.1.4.1
c.3.1.1
1skoA/T0241-1skoA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 5.2030e+011.2499e+02
1skoA/T0241-1skoA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 5.2030e+011.2499e+02
1skoA/T0241-1skoA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 5.2030e+011.2499e+02
1skoA/T0241-1skoA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 5.2030e+011.2499e+02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001