T0239 PAE0736, P. aerophilum
| Description | Link to file | Date |
| Inputs |
| Submitted sequence(s) | T0239.a2m | 2004 Jul 13 8:18:57 |
| README file | README | 2004 Jul 27 17:32:15 |
| Provided documentation | T0239.doc.html | 2004 Jul 13 8:17:31 |
| Multiple alignment |
| SAM_t04 multiple alignment in a2m format | T0239.t04.a2m.gz | 2004 Jul 13 9:03:51 |
| SAM_t04 multiple alignment in pretty html format | T0239.t04.pa.html | 2004 Jul 13 9:55:28 |
| SAM_t04 target hidden Markov model | T0239.t04.w0.5.mod | 2004 Jul 13 9:03:53 |
| SAM_t04 multiple alignment---sequence logo (eps format) (pdf format) | T0239.t04.w0.5-logo | 2004 Jul 13 9:03:58 |
| Script for highlighting in rasmol | conserved_t04 | 2004 Jul 13 9:04:00 |
| SAM_t2k multiple alignment in a2m format | T0239.t2k.a2m.gz | 2004 Jul 13 11:32:10 |
| SAM_t2k multiple alignment in pretty html format | T0239.t2k.pa.html | 2004 Jul 13 11:50:37 |
| SAM_t2k target hidden Markov model | T0239.t2k.w0.5.mod | 2004 Jul 13 11:32:20 |
| SAM_t2k multiple alignment---sequence logo (eps format) (pdf format) | T0239.t2k.w0.5-logo | 2004 Jul 13 11:32:25 |
| Script for highlighting in rasmol | conserved_t2k | 2004 Jul 13 11:32:27 |
| Secondary Structure Prediction (Explanation of secondary-structure predictions) |
| str2 structure prediction (rdb format) (seq format) | T0239.t2k.str2 | 2004 Jul 13 11:32:28 |
| Script for T0239.t2k.str2 coloring in rasmol | T0239.t2k.str2-color.rasmol | 2004 Jul 13 11:32:29 |
| str2---sequence logo (eps format) (pdf format) | T0239.t2k.str2-logo | 2004 Jul 13 11:32:33 |
| stride-ebghtl structure prediction (rdb format) (seq format) | T0239.t2k.stride-ebghtl | 2004 Jul 13 11:32:21 |
| Script for T0239.t2k.stride-ebghtl coloring in rasmol | T0239.t2k.stride-ebghtl-color.rasmol | 2004 Jul 13 11:32:34 |
| stride-ebghtl---sequence logo (eps format) (pdf format) | T0239.t2k.stride-ebghtl-logo | 2004 Jul 13 11:32:38 |
| dssp-ebghstl structure prediction (rdb format) (seq format) | T0239.t2k.dssp-ebghstl | 2004 Jul 13 11:32:39 |
| Script for T0239.t2k.dssp-ebghstl coloring in rasmol | T0239.t2k.dssp-ebghstl-color.rasmol | 2004 Jul 13 11:32:40 |
| dssp-ebghstl---sequence logo (eps format) (pdf format) | T0239.t2k.dssp-ebghstl-logo | 2004 Jul 13 11:32:43 |
| alpha structure prediction (rdb format) (seq format) | T0239.t2k.alpha | 2004 Jul 13 11:32:44 |
| Script for T0239.t2k.alpha coloring in rasmol | T0239.t2k.alpha-color.rasmol | 2004 Jul 13 11:32:45 |
| alpha---sequence logo (eps format) (pdf format) | T0239.t2k.alpha-logo | 2004 Jul 13 11:32:48 |
| bys structure prediction (rdb format) (seq format) | T0239.t2k.bys | 2004 Jul 13 11:32:49 |
| Script for T0239.t2k.bys coloring in rasmol | T0239.t2k.bys-color.rasmol | 2004 Jul 13 11:32:50 |
| dssp-ehl2 structure prediction (rdb format) (seq format) | T0239.t2k.dssp-ehl2 | 2004 Jul 13 11:32:52 |
| Script for T0239.t2k.dssp-ehl2 coloring in rasmol | T0239.t2k.dssp-ehl2-color.rasmol | 2004 Jul 13 11:32:53 |
| dssp-ehl2---sequence logo (eps format) (pdf format) | T0239.t2k.dssp-ehl2-logo | 2004 Jul 13 11:32:56 |
| CB_burial_14_7 structure prediction (rdb format) (seq format) | T0239.t2k.CB_burial_14_7 | 2004 Jul 13 11:32:57 |
| Script for T0239.t2k.CB_burial_14_7 coloring in rasmol | T0239.t2k.CB_burial_14_7-color.rasmol | 2004 Jul 13 11:32:58 |
| CB_burial_14_7---sequence logo (eps format) (pdf format) | T0239.t2k.CB_burial_14_7-logo | 2004 Jul 13 11:33:02 |
| near-backbone-11 structure prediction (rdb format) (seq format) | T0239.t2k.near-backbone-11 | 2004 Jul 13 11:33:03 |
| Script for T0239.t2k.near-backbone-11 coloring in rasmol | T0239.t2k.near-backbone-11-color.rasmol | 2004 Jul 13 11:33:03 |
| str2 structure prediction (rdb format) (seq format) | T0239.t04.str2 | 2004 Jul 13 11:33:05 |
| Script for T0239.t04.str2 coloring in rasmol | T0239.t04.str2-color.rasmol | 2004 Jul 13 11:33:06 |
| str2---sequence logo (eps format) (pdf format) | T0239.t04.str2-logo | 2004 Jul 13 11:33:10 |
| stride-ebghtl structure prediction (rdb format) (seq format) | T0239.t04.stride-ebghtl | 2004 Jul 13 9:03:54 |
| Script for T0239.t04.stride-ebghtl coloring in rasmol | T0239.t04.stride-ebghtl-color.rasmol | 2004 Jul 13 11:33:12 |
| stride-ebghtl---sequence logo (eps format) (pdf format) | T0239.t04.stride-ebghtl-logo | 2004 Jul 13 11:33:17 |
| dssp-ebghstl structure prediction (rdb format) (seq format) | T0239.t04.dssp-ebghstl | 2004 Jul 13 11:33:19 |
| Script for T0239.t04.dssp-ebghstl coloring in rasmol | T0239.t04.dssp-ebghstl-color.rasmol | 2004 Jul 13 11:33:22 |
| dssp-ebghstl---sequence logo (eps format) (pdf format) | T0239.t04.dssp-ebghstl-logo | 2004 Jul 13 11:33:26 |
| alpha structure prediction (rdb format) (seq format) | T0239.t04.alpha | 2004 Jul 13 11:33:29 |
| Script for T0239.t04.alpha coloring in rasmol | T0239.t04.alpha-color.rasmol | 2004 Jul 13 11:33:31 |
| alpha---sequence logo (eps format) (pdf format) | T0239.t04.alpha-logo | 2004 Jul 13 11:33:36 |
| bys structure prediction (rdb format) (seq format) | T0239.t04.bys | 2004 Jul 13 11:33:39 |
| Script for T0239.t04.bys coloring in rasmol | T0239.t04.bys-color.rasmol | 2004 Jul 13 11:33:40 |
| dssp-ehl2 structure prediction (rdb format) (seq format) | T0239.t04.dssp-ehl2 | 2004 Jul 13 11:33:44 |
| Script for T0239.t04.dssp-ehl2 coloring in rasmol | T0239.t04.dssp-ehl2-color.rasmol | 2004 Jul 13 11:33:44 |
| dssp-ehl2---sequence logo (eps format) (pdf format) | T0239.t04.dssp-ehl2-logo | 2004 Jul 13 11:33:49 |
| CB_burial_14_7 structure prediction (rdb format) (seq format) | T0239.t04.CB_burial_14_7 | 2004 Jul 13 11:33:53 |
| Script for T0239.t04.CB_burial_14_7 coloring in rasmol | T0239.t04.CB_burial_14_7-color.rasmol | 2004 Jul 13 11:33:54 |
| CB_burial_14_7---sequence logo (eps format) (pdf format) | T0239.t04.CB_burial_14_7-logo | 2004 Jul 13 11:33:59 |
| near-backbone-11 structure prediction (rdb format) (seq format) | T0239.t04.near-backbone-11 | 2004 Jul 13 11:34:02 |
| Script for T0239.t04.near-backbone-11 coloring in rasmol | T0239.t04.near-backbone-11-color.rasmol | 2004 Jul 13 11:34:04 |