# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1s7oA	113	6.84e-01			
1gvjA	146	5.19e+00		a.4.5.21	-293
1dun	134	5.23e+00	1dun	b.85.4.1	28371
1c4kA	730	1.11e+01	1ordA	c.23.1.4	31273
				c.67.1.5	34502
				d.125.1.1	41123
1g2rA	100	1.40e+01	1g2rA	d.192.1.1	60231
1dyr	206	1.50e+01	1aoeA	c.71.1.1	34916
1vk8A	106	1.65e+01			
1fo4A	1332	1.80e+01		a.56.1.1	17910
				d.15.4.2	37695
				d.41.1.1	38586
				d.87.2.1	40227
				d.133.1.1	41416
				d.145.1.3	41758
1b0nA	111	1.96e+01	1b0nA	a.34.1.1	17001
				a.35.1.3	17064
1v97A	1332	2.03e+01			
1lfjA	119	2.48e+01			
1o86A	589	3.10e+01		d.92.1.5	81177
1j71A	334	3.27e+01	1eagA	b.50.1.2	62669
1sr9A	644	3.38e+01			
1c2aA	120	3.40e+01	1c2aA	g.3.13.1	44349
				g.3.13.1	44350
1a8vA	121	3.60e+01	1a62	a.140.3.1	64712
				b.40.4.5	64713
6paxA	133	3.75e+01	6paxA	a.4.1.5	64758
				a.4.1.5	64759
1rwsA	77	3.82e+01		d.15.3.2	-9182