Best Alignments for T0238

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bidA/T0238-2bidA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2bidA/T0238-2bidA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.0422e+005.0131e-01 2bidA f.1.4.1
1q4mA/T0238-1q4mA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1q4mA/T0238-1q4mA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.1175e+002.4591e-01 unknown_sccs
1bxlA/T0238-1bxlA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1bxlA/T0238-1bxlA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.2866e+002.8246e-01 1maz f.1.4.1
1pq1A/T0238-1pq1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pq1A/T0238-1pq1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0727e+011.0343e+00 f.1.4.1
1jcrA/T0238-1jcrA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jcrA/T0238-1jcrA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6397e+015.4820e+00 a.118.6.1
1d8dA/T0238-1d8dA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1d8dA/T0238-1d8dA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6499e+016.2595e+00 1ft1A a.118.6.1
1tbmA/T0238-1tbmA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1tbmA/T0238-1tbmA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0587e+016.1687e+00
1n2tA/T0238-1n2tA-t04-local-adpstyle1.a2m 1n2tA/T0238-1n2tA-t04-local-adpstyle1.al 2.5633e+011.2180e+01 c.67.1.3
1ju9A/T0238-1ju9A-t2k-global-adpstyle5.a2m 1ju9A/T0238-1ju9A-t2k-global-adpstyle5.al 3.5101e+011.6361e+01 b.35.1.2
c.2.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001