Citations (SAM, SAM-T99, HMMs)
10 20 30 40
| | | |
1 ...M.KKAKL..NII.KIN.IIAMI...LTLICTSCAPFS.KIDPKANA...NT.....KPKK..
2 ...M.KKAKL..NII.KIN.IIAMI...LTLICTSCAPFS.KIDPKANA...NT.....KPKK..
3 ...M.KNFKL..NTI.KLN.VITAI...LTLICISCAPFG.NVNPNKLK...NP.....ITSKn2
4 ...M.KNFKL..NTI.KLN.VITAI...LTLICISCAPFG.NVNPNKLK...NP.....ITSKn2
5 ...M.KNFKL..NII.KLN.VITAI...LTSICISCAPFG.NVNPNEPK...NP.....TTSKs3
6 ...M.KNLKL..NII.KLN.VITAI...LTSICISCAPFG.NVNPNEPK...NP.....TTSKs3
7 ...M.KKAKL..NII.KIN.IITMI...LTLICISCAPFN.KINPKANE...NT.....KLKKnt
8 ttaA.RAASL..TKQ.RIP.I-QAV...TTVPG-NTRTFN.SRNSGLPT...FA.....LNYS..
9 ttaA.RAASL..TKQ.RIP.I-QAV...TTVPG-NTRTFN.SRNSGLPT...FA.....LNYS..
10 ...M.KNNKL..--I.AIF.LLHVL...TVLILISCSLEV.KDSNESKK...HK.....KEKRk1
11 dniL.KNNKL..--I.AIF.LLHVL...TVLILISCSLEV.KDSNESKK...HK.....KEKRk1
12 kenI.RNVPT..KAQ.STP.LKQIA...PTPTVTTARKGV.KTTPTRGLr..FG.....QPRK..
13 ...M.NKIKL..SIL.---.ITLGI...TTFF--SCDLNN.KDNKDKVAsftET.....KYNE..
14 ...-.-----..---.--P.-PKQI...ASAQAIQTVPNN.TSTPSQSI...I-.....KPQQ..
15 ...M.KRNKIw.KTL.KLF.---QI...TLLF--SCSFYS.KSNNTEAI...SElq6piKLGK..
16 rqnL.ANAFIstTILsAIPgIIMAVpvgLTFGGF-CAIYGaKIPKKLAE...NP.....KIDE..
17 ...-.-----..---.---.-----...------------.-------M...AP.....EVNS..
18 ...-.-----..---.---.-----...------------.--------...--.....----..
19 ...-.-----..---.---.-----...------------.--------...--.....----..
20 ...MhKESVL..TKN.KLN.IIATI...LTLIGTSCA-VN.PIGP----...--.....KVKS..
50 60 70
| | |
1 ...IT..NP.....G....EN...TQ.NFE.....D..KSGD....LST.SDE.....KIM.ET.
2 ...IT..NP.....G....EN...TQ.NFE.....D..KSGD....LST.SDE.....KIM.ET.
3 2tnSE..NS.....A....EN...NQ.NLE.....N..ESQN....SKS.SNQ.....NPQeET.
4 2tnSE..NS.....A....EN...NQ.NLE.....N..ESQN....SKS.SNQ.....NPQeET.
5 0nsTK..NP.....S....EN...NQ.NLE.....N..ESQN....SKS.SNQ.....NSQeET.
6 0nsTK..NP.....S....EN...NQ.NLE.....N..ESQN....SKS.SNQ.....NSQeET.
7 6kkPA..NP.....G....EN...IQ.NFK.....D..KSGD....LGA.SDE.....KFM.GT.
8 ...FS..QP.....T....RQ...QT.NSS.....S..AVQT....TTS.SGS.....KLQ.-T.
9 ...FS..QP.....T....RQ...QT.NSS.....F..AVQT....TTS.SGS.....KLQ.-T.
10 3nnLK..NPtkpaaG....KN...KA.NSKas6knN..PNAN....ANN.APK.....KIL.DP.
11 3nnLK..NPtkpaaG....KN...KA.NSKas6knN..PNAN....ANN.APK.....KIL.DP.
12 ...YAl.NH.....G....SS...QS.NFN.....Nl.QNNNssiiFKQ.AQP.....SFI.QTs
13 ...LSp.QK.....G....TK...TQ.DQR.....St.KNLK....VSN.KGEadlidKLF.EI.
14 ...YT..SS.....SsfsqPN...SQtNFN.....Ns.QSNN....VPS.NYRhqtqpSFV.SP.
15 ...IKvlQK.....T....EKivsTQ.NLQ.....NlqQSQF....FKN.EKE.....KII.KK.
16 ...DS..GI.....S....EH...SG.NSE.....T..PSED....EKD.NNE.....-FF.D-.
17 ...YT..NT.....K....ED...TE.NLK.....N..ASGD....INSlSQK.....SLK.EV.
18 ...--..--.....-....--...--.---.....-..----....---.---.....---.--.
19 ...--..--.....-....--...--.---.....-..----....---.---.....---.--.
20 ...RT..DI.....K....ES...NQ.---.....-..KSGN....PES.LNQ.....KYQeET.
80 90 100
| | |
1 ....IA.....SE...L.KAIGKEL.....EDQKKEENIQ...IA.....KIA.....KE...K.
2 ....IA.....SE...L.KAIGKEL.....EDQKKEENIQ...IA.....KIA.....KE...K.
3 ....AI.....SK...L.EKIGKDL.....EAQKKEKDTQ...IE.....KIS.....SDa..Q.
4 ....AI.....SK...L.EKIGKDL.....EAQKKEKDTQ...IE.....KIS.....SDa..Q.
5 ....TI.....SK...L.KNIGKDL.....EAQKKKEDTG...IT.....KMSkid..NA...K.
6 ....TI.....SK...L.KNIGKDL.....EAQKKKEDTG...IT.....KMSkid..NA...K.
7 ....TA.....SE...L.KAIGKEL.....EDRKNQYDIQ...IA.....KIT.....NE...E.
8 ....LK.....NE...LiRAISE--.....EKNKTQNNFG...FRet6qfKMK.....DS...A.
9 ....LK.....NE...LiRAISE--.....EKNKTQNNFG...FRet6qfKMK.....DS...A.
10 ....EV.....AK...L.--IQKIL.....D--RSENIIQ...IS.....EMDss6epND...Q.
11 ....EV.....AK...L.--IQKIL.....D--RSENIIQ...IS.....EMDss6epND...Q.
12 s7qsLA.....SKndlL.RRINE--.....EKNKIQNNNG...FRet6qfKMK.....DS...A.
13 ....LA.....RE...M.TIIKK--.....EKLQTEIPSQ...FG.....-LK.....NS...M.
14 ....VYsgn..SP...L.QKLKNNLlrriaEEKNKTHNHG...FRet6qfKMK.....DS...A.
15 ....IAqe6enEK...LiNKIGPNI.....EMFAQTINTD...IQ.....KIEp....ND...Q.
16 ....--.....--...F.QKISPKL.....KILENSNNLGpqiLE.....YLE.....KS...Qk
17 ....TI.....AK...L.KEFGNKL.....TAQKNEETTK...IE.....KIT.....AE...Ke
18 ....--.....NE...LlSWINNFV.....EVNNKAIDNS...FE.....KFK.....SEpsnQ.
19 ....--.....--...-.-------.....----------...--.....---.....--...-.
20 ....KV.....SK...L.EAPTKKL.....KDQKNE----...--.....---.....--...-.
110 120 130
| | |
1 FDF.LSTF....K.V....GPY.....D..L...IDEDI.Q.....MKI.....KR.TLYSSLDY
2 FDF.LSTF....K.V....GPY.....D..L...IDEDI.Q.....MKI.....KR.TLYSSLDY
3 YDF.LENF....K.L....HNY.....D..Y...FMHNT.K.....MTL.....KK.IIYSSLNY
4 YDF.LENF....K.L....HNY.....D..Y...FMHNT.K.....MTL.....KK.IIYSSLNY
5 YDF.LETF....K.L....KQD.....D..V...FMFHA.K.....MKL.....KR.IIYPSLNY
6 YDF.LETF....K.L....KQD.....D..V...FMFXA.K.....MKL.....KR.IIYPSLNY
7 SNL.LDTY....-.I....RAY.....E..L...ANENE.K.....MLL.....KR.FLLSSLDY
8 FEL.LDVIssa.K.V....YDR.....S..YapqLNSNTpE.....AEN.....ERnKFYALMDF
9 FEL.LDVIssa.K.V....YDR.....S..YapqLNSNTpE.....AEN.....ERnKFYALMDF
10 FGMrAEIFs...K.IffnaNST.....V..H...FDSHE.Y.....TEE.....RR.MLYTSLNF
11 FGMrAEIFs...K.IffnaNST.....V..H...FDSHE.Y.....TEE.....RR.MLYTSLNF
12 FEL.LDV-....-.I....SNI.....S..V...FDRSY.A.....PQLn10neRN.KFYAIMDF
13 FEL.LNVY....K.I....DST.....NgtR...LQEKM.Nss6esQKM.....RR.QFYSSLSY
14 FTL.LDV-....-.I....SNI.....S..V...FDRGF.A.....PQLs10neRN.RLYAMMDF
15 FGI.NKTLftekK.D....NNI.....D..Fm..LKDN-.-.....-RL.....RR.LFYSSLNY
16 FGI.LITL....R.D....VAT.....-..L...LESPT.T.....SEN.....TV.RI----QY
17 SDL.LETLds..K.I....QPVyf8ttE..E...TKNNV.K.....MQI.....KR.IIYSSLDY
18 YNL.P--F....KnV....SWY.....T..LrktLADNV.Ees...KKA.....RG.CLYAVLDY
19 ---.----....-.-....---.....-..-...-----.-.....---.....--.--------
20 ---.----....-.-....---.....-..-...-----.-.....---.....--.--------
140 150 160 170 180
| | | | |
1 KKENIEKLK.E...ILEILKKNSEHY.NIIGRLIYHIS....WGIQFQIEQN...L.ELIQ.NGV
2 KKENIEKLK.E...ILEILKKNSEHY.NIIGRLIYHIS....WGIQFQIEQN...L.ELIQ.NGV
3 EKEKILTLK.E...ILEKLDTEDNNR.RIAGQFL-ETS....RDIQLQQEDLi..L.KKIQ.DTL
4 EKEKILTLK.E...ILEKLDTEDNNR.RIAGQFL-ETS....RDIQLQQEDLi..L.KKIQ.DTL
5 DTKKILVLK.E...ILEKLDTEDNNR.RIAGQFL-ETS....RDIQLHLEDTy..L.KKIQ.DTL
6 DTKKILVLK.E...ILEKLDTEDNNR.RIAGQFL-ETS....RDIQLHLEDTy..L.KKIQ.DTL
7 KKENIETLK.E...ILEKLINNYENDpKIAANFLYRIA....LDIQLKLEKH...L.KSIN.EKL
8 DQYKIEQFG.S...IMEALYNENQNH.SLIRELMIS-G....LGTQISFELA...L.EEIN.KKI
9 DQYKIEQFG.S...IMETLYNENQNH.SLIRELMIS-G....LGTQISFELA...L.EEIN.KKI
10 NEGKIFNLG.Q...ILSKLSQDSNYR.GLVKETLINRG....FSIQLAMEEIsakI.LNVK.DKL
11 NEGKIFNLG.Q...ILSKLSQDSNYR.GLVKETLINRG....FSIQLAMEEIsakI.LNVK.DKL
12 DQSKTTQFG.S...IMEILYQENQNH.SLIRSLIIS-G....LGIQISLEHS...L.EELG.KKI
13 NTTDIFNLA.E...IVNKLYKDPKAH.DTIKK--ISGG....IRIQQGFEVA...L.EDLA.INM
14 DQAKTTKFG.S...IMNILYQEDQNH.SLIRSLIIS-G....LGIQVSLENA...L.EEIE.RKI
15 DENKIKKLA.T...ILAQTSSSNDYH.YTLIGLIFWTG....FKIQEAFESAvniLtKDEQ.KRL
16 KKRKIKIVKiEnsgILEMFENSRNSD.GSPILILLEKGnsedFKIQNLAENRqf.V.MEIK.---
17 DKGEIKKLK.E...IIEKVKGKDGGE.YMIIDLLYGKA....LDIQTQIDKH...L.ESTKeDNL
18 NESELKELG.L...ILN--SNLHSIK.KIANKIMQNAG....IEFQFRFEAImrlL.LDKK.NNL
19 ----MNKLK.E...ILETLKGSPDYE.NIIIGLLYHKA....LGIQEQLDSH...L.ELIQ.KK-
20 ---------.-...------------.-----------....----------...-.----.---
190 200 210 220
| | | |
1 .EN.....LSQEE....SKSL.....LMQI.KSNL..E.IKQR..LKKTLNETLKVYNQ...N..
2 .EN.....LSQEE....SKSL.....LMQI.KSNL..E.IKQR..LKKTLNETLKVYNQ...N..
3 .QT.....LSKEK....AEEL.....LQHA.ERDL..K.IKQN..FVKALNATIEAYNKnsdN..
4 .QT.....LSKEK....AEEL.....LQHA.ERDL..K.IKQN..FVKALNATIEAYNKnsdN..
5 .QT.....LSEKE....AEKL.....LQGV.KLDL..K.KKQN..FAKSLNATIDAYNKnvdN..
6 .QT.....LSEKE....AEKL.....LQGV.KLDL..K.KKQN..FAKSLNATIDAYNKnvdN..
7 .DT.....LSKENskedLEAL.....LEQV.KSAL..Q.LQEK..FKKTLNKTLEDYRKntnN..
8 .EI.....FNQDY....LNAK.....INSF.DFTM..K.LKE-..LKSKLNQILDKRKEw..S..
9 .EI.....FNQDY....LNAK.....INSF.DFTM..K.LKE-..LKSKLNQILDKRKEw..S..
10 .QQ.....LNKPN....LETL.....YNDF.E-KL..TsLKEK..WLKDTDDLIDEYNT...Npd
11 .QQ.....LNKPN....LETL.....YNDF.E-KL..TsLKEK..WLKDTDDLIDEYNT...Npd
12 .EI.....FSQEY....SNNR.....ISRF.DFDA..K.MKE-..LDSKLNQILIERNEw..S..
13 .DKlkandFNKNT....LEEI.....YNLIvDLTL..I.KKE-..WLSTIETLIKSSNAtl.E..
14 .ES.....FNTQY....LKTIin9dkLQEL.ESKLnsI.LAEKkeWSNYADAIIANTNS...Ns.
15 iFN.....FRTKT....VKEI.....QENF.E-KL..M.QERNs.WIKIVDNIIGEYDK...Ntg
16 .EI.....FEKNG....EEKI.....VEKS.DSEI..L.IIRK..-GGVINLYFCEVWD...F..
17 .NT.....LSEEN....LKEL.....LIHV.EFDL..I.LKEK..FKKALKKTVGEVPQ...E..
18 .ML.....LNIPD....LKRI.....KICL.ENFL..S.LRTT..FRELVKQLLNDYNS...Nke
19 .--.....---EE....LNDL.....LIHA.EFDL..M.LKEK..FKETLEKTVKEVYP...E..
20 .--.....-----....----.....----.----..-.----..--------------...-..
230 240 250
| | |
1 .TQDNEKILA.EHFNKYY.KD.FDTLKPAF...Y....
2 .TQDNEKILA.EHFNKYY.KD.FDTLKPAF...Y....
3 .IKIDNKALA.NHMEKKYsHP.LYLLDQAD...-....
4 .IKTDVEALA.NHMEKKYsHP.LYLLDQAD...-....
5 .IKIDNKALA.KHIKDKYsHP.LYLLNQAD...-....
6 .IKIDNKALA.KHIKDKYsHP.LYLLNQAD...-....
7 .IQ-ENKVLA.EHFNKYY.KD.SDSLQSAF...Y....
8 .RQADGLIAN.ASSNSSL.SD.SKSLAEYIkkrY....
9 .RQADGLIAN.ASSNSSL.SD.SKSLAEYIkkrY....
10 .LQTDVSKLN.DTLRSKN.SR.AQFANIHD...Iild.
11 .LQTDVSKLN.DTLRSKN.SR.AQFANIHD...Iild.
12 .KQVDALITN.VSSNTSL.SD.SNTLAQYIqnrY....
13 .LQYNTEKLN.DHIEQTY.KD.TMISLCLK...S....
14 .RRSNPQSLG.QYIENRY.LDkMQDARQSA...Ldly.
15 gCKADGKILG.EVIRVGYeHE.LDSNKSMQ...Ilnn.
16 .RNFGNSEFP.KTLEILH.HG.HHFPAHHD...Pahh.
17 .IQKIEKETN.--IK---.--.--------...-....
18 sIKSENIKLG.DYLNKAF.SDiVLSMDKNP...Inle.
19 .IQKIKEEYSvKKITEGL.-D.TEILEKNE...-....
20 .---------.-------.--.--------...-....