# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1k7wA	468	1.41e+00		a.127.1.1	72130
1mr3F	181	2.88e+00		c.37.1.8	79422
1h6qA	168	5.16e+00	1h6qA	b.88.1.2	60692
1jj2I	145	1.11e+01	1ffkG	c.21.1.1	63094
1poxA	585	1.29e+01	1poxA	c.31.1.3	31731
				c.36.1.5	31793
				c.36.1.9	31794
1ngkA	128	1.34e+01		a.1.1.1	85673
1pyfA	312	1.42e+01		c.1.7.1	-5251
1v4xA	144	1.48e+01			
1fo1A	271	1.52e+01	1fo1A	c.10.2.3	30869
				d.58.7.2	39213
1kl9A	182	2.43e+01		b.40.4.5	72681
1hy0A	466	2.50e+01	1auwA	a.127.1.1	61392
1ltlA	279	2.53e+01		b.40.4.11	84701
1v4eA	299	2.55e+01		a.128.1.1	-1781
1d8dA	377	2.63e+01	1ft1A	a.118.6.1	19185
1iicA	422	2.67e+01	1nmtA	d.108.1.2	62422
				d.108.1.2	62423
1aihA	170	2.72e+01	1aihA	d.163.1.1	42149
1vdeA	454	3.00e+01	1vdeA	b.86.1.2	28378
				d.95.2.2	40581
				d.95.2.2	40582
1o1yA	239	3.01e+01		c.23.16.1	86554
1v32A	101	3.14e+01		a.42.1.1	-912
1lngA	87	3.16e+01		d.201.1.1	74045
1fx8A	281	3.22e+01		f.19.1.1	43651
1uk5A	111	3.38e+01		a.7.7.1	-395
1jj2K	164	3.42e+01	1ffkJ	c.12.1.1	63096
1l8wA	348	3.65e+01		a.154.1.1	73704
1s72L	165	3.70e+01			
1ldfA	281	3.76e+01		f.19.1.1	73845
1ld8A	382	3.81e+01		a.118.6.1	73838