Best Alignments for T0237

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1hn6A/T0237-1hn6A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hn6A/T0237-1hn6A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.5654e-172.9798e-20 g.61.1.1
1mmg/1lvk-T0237-fssp-local-adpstyle5.a2m 1mmg/1lvk-T0237-fssp-local-adpstyle5.al 4.2738e+001.8127e+00 1lvk b.34.3.1
c.37.1.9
1fmvA/1lvk-T0237-fssp-local-adpstyle5.a2m 1fmvA/1lvk-T0237-fssp-local-adpstyle5.al 9.3359e+003.4763e+00 1lvk b.34.3.1
c.37.1.9
1g8xA/1lvk-T0237-fssp-local-adpstyle5.a2m 1g8xA/1lvk-T0237-fssp-local-adpstyle5.al 1.0459e+013.8215e+00 1lvk k.1.1.1
1tocR/T0237-1tocR-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1tocR/T0237-1tocR-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2274e+011.7352e+00 1tocR g.8.1.2
1jx2A/T0237-1jx2A-t2k-global-adpstyle1.a2m 1jx2A/T0237-1jx2A-t2k-global-adpstyle1.al 1.3796e+016.7485e+00 b.34.3.1
c.37.1.9
1kt5A/T0237-1kt5A-t2k-global-adpstyle5.a2m 1kt5A/T0237-1kt5A-t2k-global-adpstyle5.al 1.6686e+011.2248e+01 b.60.1.1
1jydA/T0237-1jydA-t2k-global-adpstyle1.a2m 1jydA/T0237-1jydA-t2k-global-adpstyle1.al 1.8295e+011.2125e+01 b.60.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001