Best Alignments for T0237

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1hn6A/T0237-1hn6A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hn6A/T0237-1hn6A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.6019e-196.9754e-23 g.61.1.1
1t3eA/T0237-1t3eA-t2k-local-adpstyle1.a2m 1t3eA/T0237-1t3eA-t2k-local-adpstyle1.al 1.5175e+011.3928e+01
2ctx/3ebx-T0237-fssp-local-adpstyle5.a2m 2ctx/3ebx-T0237-fssp-local-adpstyle5.al 1.5986e+015.2675e+00 3ebx g.7.1.1
1lmrA/T0237-1lmrA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lmrA/T0237-1lmrA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.2503e+011.2296e+01 g.3.6.3
1e4uA/T0237-1e4uA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1e4uA/T0237-1e4uA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.5890e+017.7824e+00 1e4uA g.44.1.1
1qk7A/T0237-1qk7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1qk7A/T0237-1qk7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.6057e+011.6400e+01 1qk7A g.3.6.2
1v8kA/T0237-1v8kA-t2k-global-adpstyle1.a2m 1v8kA/T0237-1v8kA-t2k-global-adpstyle1.al 2.6271e+011.1307e+01 c.37.1.9
1pq2A/T0237-1pq2A-t04-global-adpstyle5.a2m 1pq2A/T0237-1pq2A-t04-global-adpstyle5.al 2.8112e+011.1964e+01 a.104.1.1
1kvx/1poa-T0237-fssp-local-adpstyle5.a2m 1kvx/1poa-T0237-fssp-local-adpstyle5.al 3.2251e+019.4959e+00 1poa a.133.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001