Best Alignments for T0234

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dnlA/T0234-1dnlA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dnlA/T0234-1dnlA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.9629e-061.2794e-12 1ci0A b.45.1.1
1nrgA/T0234-1nrgA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1nrgA/T0234-1nrgA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2646e-041.7826e-10 b.45.1.1
1axj/T0234-1axj-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1axj/T0234-1axj-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.5692e-022.2462e-06 1axj b.45.1.1
1plq/T0234-1plq-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1plq/T0234-1plq-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.5986e+003.4742e-01 1plq d.131.1.2
1ko3A/T0234-1ko3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ko3A/T0234-1ko3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.8430e+007.0192e-01 d.157.1.1
1ml5d/T0234-1ml5d-t2k-global-adpstyle1.a2m 1ml5d/T0234-1ml5d-t2k-global-adpstyle1.al 1.0788e+014.7509e+00

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001