Best Alignments for T0231

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1f7sA/T0231-1f7sA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f7sA/T0231-1f7sA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.7817e-222.4938e-31 1cof d.109.1.2
1v6fA/T0231-1v6fA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1v6fA/T0231-1v6fA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.4446e-226.5901e-31
1m4jA/T0231-1m4jA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1m4jA/T0231-1m4jA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2762e-183.2130e-25 d.109.1.2
1hqz1/T0231-1hqz1-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hqz1/T0231-1hqz1-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.8901e-101.6764e-18
1hqz9/T0231-1hqz9-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hqz9/T0231-1hqz9-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9683e-102.4505e-18
1udmA/T0231-1udmA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1udmA/T0231-1udmA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.9297e-064.2746e-21

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001