Best Alignments for T0225

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1n2sA/T0225-1n2sA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1n2sA/T0225-1n2sA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.4704e-311.1463e-49 c.2.1.2
1oc2A/T0225-1oc2A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1oc2A/T0225-1oc2A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.3182e-311.3960e-51 c.2.1.2
1bxkA/T0225-1bxkA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1bxkA/T0225-1bxkA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.7460e-313.2610e-52 1bxkA c.2.1.2
1r6dA/T0225-1r6dA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1r6dA/T0225-1r6dA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.7760e-312.9570e-53 c.2.1.2
1udc/T0225-1udc-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1udc/T0225-1udc-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2501e-309.3582e-52 1xel c.2.1.2
1kewA/T0225-1kewA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kewA/T0225-1kewA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.8315e-306.7353e-52 c.2.1.2
1t2aA/T0225-1t2aA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1t2aA/T0225-1t2aA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.4519e-293.4538e-48 c.2.1.2
1orrA/T0225-1orrA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1orrA/T0225-1orrA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0110e-272.6903e-46 c.2.1.2
1kc0A/T0225-1kc0A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kc0A/T0225-1kc0A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0251e-271.7549e-46
1db3A/T0225-1db3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1db3A/T0225-1db3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.5291e-279.5344e-46 1db3A c.2.1.2
1kepA/T0225-1kepA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kepA/T0225-1kepA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.3593e-272.0349e-48 c.2.1.2
1e6uA/T0225-1e6uA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1e6uA/T0225-1e6uA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 6.6022e-273.5018e-74 1bsvA c.2.1.2
1gy8A/T0225-1gy8A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gy8A/T0225-1gy8A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.4210e-276.1357e-46 c.2.1.2
1n7hA/T0225-1n7hA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1n7hA/T0225-1n7hA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.6386e-278.2365e-46 c.2.1.2
1rpnA/T0225-1rpnA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1rpnA/T0225-1rpnA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.2323e-262.0961e-45 c.2.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001