Best Alignments for T0223

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1nox/T0223-1nox-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1nox/T0223-1nox-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.7010e-101.3462e-14 1nox d.90.1.1
1bkjA/T0223-1bkjA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1bkjA/T0223-1bkjA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.4412e-083.0851e-16 1bkjA d.90.1.1
1icrA/T0223-1icrA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1icrA/T0223-1icrA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.9980e-063.2777e-09 1vfrA d.90.1.1
1kqbA/T0223-1kqbA-t04-global-adpstyle5.a2m 1kqbA/T0223-1kqbA-t04-global-adpstyle5.al 1.2787e-031.1660e-05 d.90.1.1
1jeoA/T0223-1jeoA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jeoA/T0223-1jeoA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.6862e+006.9341e-01 c.80.1.3
1dik/T0223-1dik-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dik/T0223-1dik-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1493e+011.3259e+00 1dik d.142.1.5
c.1.12.2
c.8.1.1
1kblA/T0223-1kblA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kblA/T0223-1kblA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3003e+011.4341e+00 d.142.1.5
c.1.12.2
c.8.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001