Best Alignments for T0222

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1o60A/T0222-1o60A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1o60A/T0222-1o60A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.0009e-131.3247e-30 c.1.10.4
1pe1A/T0222-1pe1A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pe1A/T0222-1pe1A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.7984e-139.0175e-29 c.1.10.4
1lroA/T0222-1lroA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lroA/T0222-1lroA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0954e-122.5613e-28 c.1.10.4
1jcxA/T0222-1jcxA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jcxA/T0222-1jcxA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.5345e-121.3960e-28 c.1.10.4
1fxpA/T0222-1fxpA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fxpA/T0222-1fxpA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.8488e-121.7734e-28 1d9eA c.1.10.4
2tpsA/T0222-2tpsA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2tpsA/T0222-2tpsA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.0937e-042.4765e-16 2tpsA c.1.3.1
1of8A/T0222-1of8A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1of8A/T0222-1of8A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 8.6245e-041.2975e-14 c.1.10.4
1eyeA/T0222-1eyeA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1eyeA/T0222-1eyeA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.3195e-034.4262e-20 1aj2 c.1.21.1
1p4cA/T0222-1p4cA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1p4cA/T0222-1p4cA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.7463e-034.0356e-18 c.1.4.1
1hfbA/T0222-1hfbA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1hfbA/T0222-1hfbA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.1282e-035.9536e-15 c.1.10.4
1huvA/T0222-1huvA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1huvA/T0222-1huvA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.2986e-037.6344e-18 c.1.4.1
1p0kA/T0222-1p0kA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1p0kA/T0222-1p0kA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.9752e-037.1970e-21 c.1.4.1
1gox/T0222-1gox-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1gox/T0222-1gox-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.9799e-032.8414e-19 1gox c.1.4.1
1thfD/T0222-1thfD-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1thfD/T0222-1thfD-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 4.9490e-031.9735e-15 1thfD c.1.2.1
1bqcA/T0222-1bqcA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1bqcA/T0222-1bqcA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.0431e-038.3646e-17 1bqcA c.1.8.3
1vh7A/T0222-1vh7A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1vh7A/T0222-1vh7A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.5124e-032.5499e-14 c.1.2.1
1pii/T0222-1pii-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1pii/T0222-1pii-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.5342e-037.8155e-15 1pii c.1.2.4
1nvmA/T0222-1nvmA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1nvmA/T0222-1nvmA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.9648e-037.7725e-23 c.1.10.5
a.5.7.1
1gt8B/T0222-1gt8B-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1gt8B/T0222-1gt8B-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 7.1925e-036.9451e-24 c.4.1.1
d.58.1.5
c.1.4.1
a.1.2.2
c.3.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001