Best Alignments for T0222

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ucsA/T0222-1ucsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ucsA/T0222-1ucsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2015e-023.3584e-04 b.85.1.1
1msi/T0222-1msi-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1msi/T0222-1msi-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.4024e-021.1868e-03 1msi b.85.1.1
1c89A/T0222-1c89A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1c89A/T0222-1c89A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.9569e-013.5224e-02 1msi b.85.1.1
1ml9A/T0222-1ml9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ml9A/T0222-1ml9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.3027e+004.6750e+00 b.85.7.1
1fr2B/T0222-1fr2B-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fr2B/T0222-1fr2B-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0022e+013.6047e+00 d.4.1.1
1bxiB/T0222-1bxiB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1bxiB/T0222-1bxiB-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1205e+013.6228e+00 1bxiB d.4.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001