Best Alignments for T0222

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ucsA/T0222-1ucsA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ucsA/T0222-1ucsA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.7863e-039.8200e-06 b.85.1.1
1msi/T0222-1msi-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1msi/T0222-1msi-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.9842e-032.3492e-05 1msi b.85.1.1
1c89A/T0222-1c89A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1c89A/T0222-1c89A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.5359e-022.7835e-03 1msi b.85.1.1
1lfaA/T0222-1lfaA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lfaA/T0222-1lfaA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.4226e+007.2841e-01 1ido c.62.1.1
1mjnA/T0222-1mjnA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mjnA/T0222-1mjnA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.3627e+001.0283e+00 c.62.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001