Best Alignments for T0222

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1o60A/T0222-1o60A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1o60A/T0222-1o60A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.6249e-112.0946e-28 c.1.10.4
1pe1A/T0222-1pe1A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pe1A/T0222-1pe1A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.1050e-111.3060e-26 c.1.10.4
1lroA/T0222-1lroA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lroA/T0222-1lroA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6175e-104.9508e-26 c.1.10.4
1jcxA/T0222-1jcxA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jcxA/T0222-1jcxA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.1135e-102.8873e-26 c.1.10.4
1fxpA/T0222-1fxpA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fxpA/T0222-1fxpA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.6919e-104.0283e-26 1d9eA c.1.10.4
1phwA/T0222-1phwA-t04-global-adpstyle5.a2m 1phwA/T0222-1phwA-t04-global-adpstyle5.al 5.2086e-043.9029e-16
2tpsA/T0222-2tpsA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 2tpsA/T0222-2tpsA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 9.0780e-042.6017e-17 2tpsA c.1.3.1
1of8A/T0222-1of8A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1of8A/T0222-1of8A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.2764e-035.6246e-17 c.1.10.4
1ad1A/T0222-1ad1A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1ad1A/T0222-1ad1A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 4.3906e-033.6751e-17 1aj2 c.1.21.1
1rvkA/T0222-1rvkA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1rvkA/T0222-1rvkA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 4.7757e-038.6954e-14 d.54.1.1
c.1.11.2
1hfbA/T0222-1hfbA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1hfbA/T0222-1hfbA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 5.3860e-031.1015e-17 c.1.10.4
1vh7A/T0222-1vh7A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1vh7A/T0222-1vh7A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 7.4893e-035.8085e-14 c.1.2.1
1p4cA/T0222-1p4cA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1p4cA/T0222-1p4cA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 8.2892e-033.3229e-16 c.1.4.1
1thfD/T0222-1thfD-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1thfD/T0222-1thfD-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 8.3405e-032.4283e-15 1thfD c.1.2.1
1gox/T0222-1gox-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1gox/T0222-1gox-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.0482e-027.7707e-18 1gox c.1.4.1
1huvA/T0222-1huvA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1huvA/T0222-1huvA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.1245e-023.0435e-16 c.1.4.1
1mzhA/T0222-1mzhA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1mzhA/T0222-1mzhA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.9070e-029.0786e-16 c.1.10.1
1p0kA/T0222-1p0kA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1p0kA/T0222-1p0kA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.0235e-022.0890e-16 c.1.4.1
1qwgA/T0222-1qwgA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1qwgA/T0222-1qwgA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 2.6575e-023.9134e-13 unknown_sccs
1bqcA/T0222-1bqcA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1bqcA/T0222-1bqcA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.0616e-025.9443e-13 1bqcA c.1.8.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001