Best Alignments for T0221

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dnyA/T0221-1dnyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dnyA/T0221-1dnyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.3796e-128.2990e-15 1dnyA a.28.1.2
1l0iA/T0221-1l0iA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1l0iA/T0221-1l0iA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.7829e-112.1733e-13 a.28.1.1
1klpA/T0221-1klpA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1klpA/T0221-1klpA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.2667e-106.8187e-12 a.28.1.1
1f80D/T0221-1f80D-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f80D/T0221-1f80D-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.5154e-102.9493e-11 1acp a.28.1.1
2af8/T0221-2af8-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2af8/T0221-2af8-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.4249e-068.0110e-08 2af8 a.28.1.1
1l0hA/T0221-1l0hA-t2k-global-adpstyle1.a2m 1l0hA/T0221-1l0hA-t2k-global-adpstyle1.al 9.3922e-051.8365e-06 a.28.1.1
1dv5A/T0221-1dv5A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dv5A/T0221-1dv5A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.8434e-045.1136e-05 1dv5A a.28.1.3
1hy8A/T0221-1hy8A-t2k-global-adpstyle5.a2m 1hy8A/T0221-1hy8A-t2k-global-adpstyle5.al 1.9293e-047.3994e-06 a.28.1.1
1n8lA/T0221-1n8lA-t2k-global-adpstyle1.a2m 1n8lA/T0221-1n8lA-t2k-global-adpstyle1.al 1.8110e-032.3826e-04 a.28.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001