Best Alignments for T0220

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gpjA/T0220-1gpjA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gpjA/T0220-1gpjA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.7485e-101.1945e-19 d.58.39.1
a.151.1.1
c.2.1.7
1nytA/T0220-1nytA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1nytA/T0220-1nytA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0908e-061.1986e-19 c.58.1.5
c.2.1.7
1luaA/T0220-1luaA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1luaA/T0220-1luaA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.9562e-051.0076e-10 c.2.1.7
c.58.1.4
1npdA/T0220-1npdA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1npdA/T0220-1npdA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6788e-046.7125e-15 c.58.1.5
c.2.1.7
1lu9A/T0220-1lu9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lu9A/T0220-1lu9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.7206e-042.0174e-10 c.2.1.7
c.58.1.4
1vi2A/T0220-1vi2A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1vi2A/T0220-1vi2A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0853e-047.0219e-15
1sayA/T0220-1sayA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1sayA/T0220-1sayA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.7045e-042.4514e-12 1sayA c.23.12.2
c.2.1.4
1b3rA/T0220-1b3rA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1b3rA/T0220-1b3rA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.9267e-041.0176e-15 1b3rA c.23.12.3
c.2.1.4
1j3vA/T0220-1j3vA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1j3vA/T0220-1j3vA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.5640e-041.7690e-09
1pjcA/T0220-1pjcA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pjcA/T0220-1pjcA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.5784e-042.7543e-12 1sayA c.23.12.2
c.2.1.4
1bg6/T0220-1bg6-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1bg6/T0220-1bg6-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.7542e-047.0347e-09 1bg6 c.2.1.6
a.100.1.5
1p77A/T0220-1p77A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1p77A/T0220-1p77A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.7569e-044.5263e-13
1lldA/T0220-1lldA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lldA/T0220-1lldA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.8119e-034.9831e-09 3ldh d.162.1.1
c.2.1.5
1li4A/T0220-1li4A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1li4A/T0220-1li4A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0838e-036.8061e-15 c.23.12.3
c.2.1.4
1np3A/T0220-1np3A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1np3A/T0220-1np3A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.4860e-033.6644e-08 a.100.1.2
c.2.1.6
1a7aA/T0220-1a7aA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1a7aA/T0220-1a7aA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.1310e-031.3932e-14 1b3rA c.23.12.3
c.2.1.4
1a4iA/T0220-1a4iA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1a4iA/T0220-1a4iA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.3817e-031.0079e-07 1a4iA c.58.1.2
c.2.1.7
1dxy/T0220-1dxy-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dxy/T0220-1dxy-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.3135e-031.6989e-11 1dxy c.2.1.4
c.23.12.1
1edzA/T0220-1edzA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1edzA/T0220-1edzA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.8064e-035.2114e-07 1ee9A c.58.1.2
c.2.1.7
1npyA/T0220-1npyA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1npyA/T0220-1npyA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.1859e-031.0231e-11 c.58.1.5
c.2.1.7
1cf2O/T0220-1cf2O-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1cf2O/T0220-1cf2O-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.2663e-033.8570e-07 1b7gO c.2.1.3
d.81.1.1
1pzgA/T0220-1pzgA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pzgA/T0220-1pzgA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.7159e-035.5967e-07
1l3iA/T0220-1l3iA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1l3iA/T0220-1l3iA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0750e-022.8249e-06 c.66.1.22
1jayA/T0220-1jayA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jayA/T0220-1jayA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0934e-022.7841e-07 c.2.1.6
1ff9A/T0220-1ff9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ff9A/T0220-1ff9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1213e-025.9328e-08 1ff9A c.2.1.3
d.81.1.2
1hyhA/T0220-1hyhA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hyhA/T0220-1hyhA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3593e-021.1444e-07 1hyhA d.162.1.1
c.2.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001