CreatePredAlphaCost pred_alpha2k alpha11 T0215.t2k.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha04 alpha11 T0215.t04.alpha.rdb 2 alpha alpha_prev sum SetCost wet6.5 20 near_backbone 5 way_back 5 dry5 20 dry6.5 40 dry8 20 dry12 10 \ phobic_fit 2 \ sidechain 6 \ bystroff 5 \ soft_clashes 40 backbone_clashes 2 \ break 100 \ pred_alpha2k 5 \ pred_alpha04 5 \ constraints 1 \ hbond_geom 2 \ hbond_geom_backbone 1 # hbond_geom_beta 0.4 \ # hbond_geom_beta_pair 1 # extend the HIS tag StrandConstraint H5 H10 6.0 # hand-picked constraints to bring the helices closer Constraint L26 L54 3.0 5.0 10.0 1.0 Constraint F32 L48 3.0 5.0 10.0 1.0 Constraint L26 L66 3.0 7.0 10.0 1.0 Constraint L54 L66 3.0 7.0 10.0 1.0