Best Alignments for T0215

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1lqlA/T0215-1lqlA-t2k-global-adpstyle5.a2m 1lqlA/T0215-1lqlA-t2k-global-adpstyle5.al 1.0646e+009.8380e-02
1n0eA/T0215-1n0eA-t2k-global-adpstyle1.a2m 1n0eA/T0215-1n0eA-t2k-global-adpstyle1.al 1.5270e+001.1623e-01
1l2fA/T0215-1l2fA-t2k-global-adpstyle1.a2m 1l2fA/T0215-1l2fA-t2k-global-adpstyle1.al 1.5353e+007.9185e-02
1mgpA/T0215-1mgpA-t2k-global-adpstyle5.a2m 1mgpA/T0215-1mgpA-t2k-global-adpstyle5.al 1.9186e+003.8935e-01 c.119.1.1
1hx1A/1ba1-T0215-fssp-local-adpstyle5.a2m 1hx1A/1ba1-T0215-fssp-local-adpstyle5.al 2.1666e+001.0274e+00 1ba1 c.55.1.1
1nyeA/T0215-1nyeA-t2k-global-adpstyle1.a2m 1nyeA/T0215-1nyeA-t2k-global-adpstyle1.al 3.3833e+008.6255e-01
1fnoA/T0215-1fnoA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fnoA/T0215-1fnoA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.8003e+002.6351e+00 d.58.19.1
c.56.5.4
1v8pA/T0215-1v8pA-t2k-global-adpstyle5.a2m 1v8pA/T0215-1v8pA-t2k-global-adpstyle5.al 6.4636e+001.0027e+00
1v8oA/T0215-1v8oA-t2k-global-adpstyle1.a2m 1v8oA/T0215-1v8oA-t2k-global-adpstyle1.al 6.5446e+001.0309e+00
1jb9A/T0215-1jb9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jb9A/T0215-1jb9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.2562e+001.6880e+00 1fnc c.25.1.1
b.43.4.2
1nc7A/T0215-1nc7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1nc7A/T0215-1nc7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.1802e+022.2851e+01 b.123.1.1
1rcuA/T0215-1rcuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1rcuA/T0215-1rcuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3529e+022.5683e+01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001