# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1jb9A	316	1.58e+00	1fnc	b.43.4.2	62840
				c.25.1.1	62841
1exbA	332	3.76e+00	1qrqA	c.1.7.1	28666
1v64A	108	4.70e+00			
1nxuA	333	5.30e+00		c.122.1.1	86389
1gh9A	71	6.25e+00	1gh9A	g.41.6.1	45266
1ec5A	50	8.05e+00	1ec5A	k.8.1.1	46421
1fnoA	417	8.85e+00		c.56.5.4	75841
				d.58.19.1	70145
1iuz	98	1.06e+01	1plc	b.6.1.1	22861
1hh2P	344	1.36e+01		b.40.4.5	65835
				d.52.3.1	65836
				d.52.3.1	65837
				d.202.1.1	65838
1s5dA	240	1.43e+01			
1izcA	339	1.49e+01		c.1.12.5	83838
1jayA	212	1.61e+01		c.2.1.6	66478
7pcy	98	1.66e+01	1plc	b.6.1.1	22863
1ut8A	291	1.82e+01			
1xo1A	291	1.90e+01	1exnA	a.60.7.1	18086
				c.120.1.2	33356
1q77A	138	2.04e+01			
1amuA	563	2.04e+01	1amuA	e.23.1.1	43351
1unnC	115	2.16e+01			
1v0dA	329	2.23e+01			
1r72A	211	2.32e+01			
1c3pA	375	2.75e+01	1c3pA	c.42.1.2	32606
1nstA	325	3.41e+01	1nstA	c.37.1.5	31951
1jeyA	609	3.54e+01	1jeqA	e.31.1.1	62924
1j8uA	325	3.55e+01		d.178.1.1	71611
1rtwA	220	3.72e+01