Best Alignments for T0214

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jnyA/T0214-1jnyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jnyA/T0214-1jnyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0401e+002.2885e-01 b.43.3.1
b.44.1.1
c.37.1.8
1o5uA/T0214-1o5uA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1o5uA/T0214-1o5uA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0685e+002.6749e-01 b.82.1.8
1i18A/T0214-1i18A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1i18A/T0214-1i18A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2311e+008.0172e-02 b.43.4.3
1p9kA/T0214-1p9kA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1p9kA/T0214-1p9kA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.2582e+009.4594e-01 unknown_sccs
1ojgA/T0214-1ojgA-t04-global-adpstyle1.a2m 1ojgA/T0214-1ojgA-t04-global-adpstyle1.al 2.9723e+009.3227e-01 unknown_sccs
1f60A/T0214-1f60A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f60A/T0214-1f60A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.8034e+001.0345e+00 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1fjgD/T0214-1fjgD-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fjgD/T0214-1fjgD-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.4342e+002.4958e+00 1c05A d.66.1.2
1e0tA/T0214-1e0tA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1e0tA/T0214-1e0tA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.8301e+001.7039e+00 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1liuA/T0214-1liuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1liuA/T0214-1liuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.8328e+002.2337e+00 b.58.1.1
c.49.1.1
c.1.12.1
1uheA/T0214-1uheA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1uheA/T0214-1uheA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.7939e+003.1411e+00

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001