Best Alignments for T0214

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1liuA/T0214-1liuA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 5.8328e+008.2142e-08 b.58.1.1
c.49.1.1
c.1.12.1
1e0tA/T0214-1e0tA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.8301e+004.2107e-07 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1liuA/T0214-1liuA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 5.8328e+001.1011e-06 b.58.1.1
c.49.1.1
c.1.12.1
1e0tA/T0214-1e0tA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.8301e+009.7059e-06 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1i18A/T0214-1i18A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.2311e+001.5795e-05 b.43.4.3
1i18A/T0214-1i18A-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.2311e+001.7129e-05 b.43.4.3
1i18A/T0214-1i18A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.2311e+001.8140e-05 b.43.4.3
1i18A/T0214-1i18A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.2311e+002.3169e-05 b.43.4.3
1liuA/T0214-1liuA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 5.8328e+003.0490e-05 b.58.1.1
c.49.1.1
c.1.12.1
1liuA/T0214-1liuA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 5.8328e+003.2576e-05 b.58.1.1
c.49.1.1
c.1.12.1
1jnyA/T0214-1jnyA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.0401e+005.2499e-05 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/T0214-1jnyA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.0401e+001.5019e-04 b.43.3.1
b.44.1.1
c.37.1.8
1e0tA/T0214-1e0tA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.8301e+008.7694e-04 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1i18A/T0214-1i18A-t04-global-str2-1.5-adpstyle5.a2m 1.2311e+001.5129e-03 b.43.4.3
1i18A/T0214-1i18A-t2k-global-str2-1.5-adpstyle5.a2m 1.2311e+001.5445e-03 b.43.4.3
1jnyA/T0214-1jnyA-t2k-local-str2-1.5-adpstyle5.a2m 1.0401e+001.6173e-03 b.43.3.1
b.44.1.1
c.37.1.8
1f60A/T0214-1f60A-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 3.8034e+001.9734e-03 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1i18A/T0214-1i18A-t04-local-str2-1.5-adpstyle5.a2m 1.2311e+002.1658e-03 b.43.4.3
1e0tA/T0214-1e0tA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.8301e+002.4781e-03 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1jnyA/T0214-1jnyA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.0401e+002.8594e-03 b.43.3.1
b.44.1.1
c.37.1.8
1liuA/T0214-1liuA-t04-global-str2-1.5-adpstyle5.a2m 5.8328e+003.8293e-03 b.58.1.1
c.49.1.1
c.1.12.1
1liuA/T0214-1liuA-t2k-global-str2-1.5-adpstyle5.a2m 5.8328e+003.9146e-03 b.58.1.1
c.49.1.1
c.1.12.1
1i18A/T0214-1i18A-t2k-local-str2-1.5-adpstyle5.a2m 1.2311e+004.5335e-03 b.43.4.3
1o5uA/T0214-1o5uA-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.0685e+004.9986e-03 b.82.1.8
1e0tA/T0214-1e0tA-t04-global-str2-1.5-adpstyle5.a2m 4.8301e+007.0920e-03 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1liuA/T0214-1liuA-t2k-local-str2-1.5-adpstyle5.a2m 5.8328e+009.2881e-03 b.58.1.1
c.49.1.1
c.1.12.1
1e0tA/T0214-1e0tA-t2k-global-str2-1.5-adpstyle5.a2m 4.8301e+009.8856e-03 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1jnyA/T0214-1jnyA-t04-local-str2-1.5-adpstyle5.a2m 1.0401e+001.1031e-02 b.43.3.1
b.44.1.1
c.37.1.8
1o5uA/T0214-1o5uA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.0685e+001.2097e-02 b.82.1.8
1f60A/T0214-1f60A-t2k-local-str2-1.5-adpstyle5.a2m 3.8034e+001.6537e-02 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1liuA/T0214-1liuA-t04-local-str2-1.5-adpstyle5.a2m 5.8328e+001.8422e-02 b.58.1.1
c.49.1.1
c.1.12.1
1i18A/T0214-1i18A-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.2311e+002.2694e-02 b.43.4.3
1f60A/T0214-1f60A-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 3.8034e+002.7663e-02 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1i18A/T0214-1i18A-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.2311e+002.9787e-02 b.43.4.3
1e0tA/T0214-1e0tA-t2k-local-str2-1.5-adpstyle5.a2m 4.8301e+003.0820e-02 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1f60A/T0214-1f60A-t04-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 3.8034e+003.2923e-02 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1o5uA/T0214-1o5uA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.0685e+005.2003e-02 b.82.1.8
1jnyA/T0214-1jnyA-t2k-global-str2-1.5-adpstyle5.a2m 1.0401e+005.3790e-02 b.43.3.1
b.44.1.1
c.37.1.8
1f60A/T0214-1f60A-t04-local-str2-1.5-adpstyle5.a2m 3.8034e+005.8411e-02 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/T0214-1jnyA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.0401e+006.4617e-02 b.43.3.1
b.44.1.1
c.37.1.8
1i18A/T0214-1i18A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.2311e+008.0172e-02 b.43.4.3
1o5uA/T0214-1o5uA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1.0685e+008.5475e-02 b.82.1.8
1i18A/T0214-1i18A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.2311e+001.3692e-01 b.43.4.3
1uheA/T0214-1uheA-t04-local-str2-1.5-adpstyle5.a2m 7.7939e+001.5407e-01
1e0tA/T0214-1e0tA-t04-local-str2-1.5-adpstyle5.a2m 4.8301e+001.6110e-01 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1fjgD/T0214-1fjgD-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 4.4342e+001.8326e-01 1c05A d.66.1.2
1jnyA/T0214-1jnyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.0401e+002.2885e-01 b.43.3.1
b.44.1.1
c.37.1.8
1uheA/T0214-1uheA-t04-global-str2-1.5-adpstyle5.a2m 7.7939e+002.4312e-01
1fjgD/T0214-1fjgD-t04-local-str2-1.5-adpstyle5.a2m 4.4342e+002.4747e-01 1c05A d.66.1.2
1o5uA/T0214-1o5uA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.0685e+002.6749e-01 b.82.1.8
1o5uA/T0214-1o5uA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.0685e+002.7987e-01 b.82.1.8
1fjgD/T0214-1fjgD-t2k-local-str2-1.5-adpstyle5.a2m 4.4342e+002.9272e-01 1c05A d.66.1.2
1o5uA/T0214-1o5uA-t2k-local-str2-1.5-adpstyle5.a2m 1.0685e+004.6796e-01 b.82.1.8
1o5uA/T0214-1o5uA-t04-local-str2-1.5-adpstyle5.a2m 1.0685e+006.6121e-01 b.82.1.8
1uheA/T0214-1uheA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 7.7939e+006.8429e-01
1e0tA/T0214-1e0tA-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.8301e+007.1401e-01 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1o5uA/T0214-1o5uA-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.0685e+007.3586e-01 b.82.1.8
1o5uA/T0214-1o5uA-t2k-global-str2-1.5-adpstyle5.a2m 1.0685e+007.4725e-01 b.82.1.8
1o5uA/T0214-1o5uA-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.0685e+008.7169e-01 b.82.1.8
1ojgA/T0214-1ojgA-t04-global-adpstyle1.a2m 2.9723e+009.3227e-01 unknown_sccs
1ojgA/T0214-1ojgA-t04-global-adpstyle5.a2m 2.9723e+009.3227e-01 unknown_sccs
1p9kA/T0214-1p9kA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.2582e+009.4594e-01 unknown_sccs
1uheA/T0214-1uheA-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 7.7939e+009.4900e-01
1jnyA/T0214-1jnyA-t04-global-str2-1.5-adpstyle5.a2m 1.0401e+009.8581e-01 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/T0214-1jnyA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.0401e+009.8689e-01 b.43.3.1
b.44.1.1
c.37.1.8
1f60A/T0214-1f60A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 3.8034e+001.0345e+00 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1o5uA/T0214-1o5uA-t04-global-str2-1.5-adpstyle5.a2m 1.0685e+001.1190e+00 b.82.1.8
1jnyA/T0214-1jnyA-t2k-global-adpstyle5.a2m 1.0401e+001.3262e+00 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/T0214-1jnyA-t2k-global-adpstyle1.a2m 1.0401e+001.3262e+00 b.43.3.1
b.44.1.1
c.37.1.8
1ojgA/T0214-1ojgA-t2k-global-adpstyle1.a2m 2.9723e+001.4150e+00 unknown_sccs
1ojgA/T0214-1ojgA-t2k-global-adpstyle5.a2m 2.9723e+001.4150e+00 unknown_sccs
1jnyA/1jnyA-T0214-t2k-global-adpstyle1.a2m 1.0401e+001.4428e+00 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/1jnyA-T0214-t2k-global-adpstyle5.a2m 1.0401e+001.4428e+00 b.43.3.1
b.44.1.1
c.37.1.8
1fjgD/1c05A-T0214-fssp-local-adpstyle5.a2m 4.4342e+001.4564e+00 1c05A d.66.1.2
1f60A/1efcA-T0214-fssp-local-adpstyle5.a2m 3.8034e+001.5228e+00 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1i18A/T0214-1i18A-t04-global-adpstyle5.a2m 1.2311e+001.5657e+00 b.43.4.3
1i18A/T0214-1i18A-t04-global-adpstyle1.a2m 1.2311e+001.5657e+00 b.43.4.3
1f60A/1efcA-T0214-fssp-global-adpstyle5.a2m 3.8034e+001.6562e+00 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1i18A/T0214-1i18A-t2k-global-adpstyle5.a2m 1.2311e+001.6563e+00 b.43.4.3
1i18A/T0214-1i18A-t2k-global-adpstyle1.a2m 1.2311e+001.6563e+00 b.43.4.3
1jnyA/T0214-1jnyA-t2k-local-adpstyle1.a2m 1.0401e+001.6835e+00 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/T0214-1jnyA-t2k-local-adpstyle5.a2m 1.0401e+001.6835e+00 b.43.3.1
b.44.1.1
c.37.1.8
1e0tA/T0214-1e0tA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.8301e+001.7039e+00 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1o5uA/1o5uA-T0214-t04-local-adpstyle5.a2m 1.0685e+001.7060e+00 b.82.1.8
1o5uA/1o5uA-T0214-t04-local-adpstyle1.a2m 1.0685e+001.7060e+00 b.82.1.8
1o5uA/T0214-1o5uA-t2k-local-adpstyle5.a2m 1.0685e+001.7497e+00 b.82.1.8
1o5uA/T0214-1o5uA-t2k-local-adpstyle1.a2m 1.0685e+001.7497e+00 b.82.1.8
1jnyA/1jnyA-T0214-t2k-local-adpstyle1.a2m 1.0401e+001.7739e+00 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/1jnyA-T0214-t2k-local-adpstyle5.a2m 1.0401e+001.7739e+00 b.43.3.1
b.44.1.1
c.37.1.8
1e0tA/T0214-1e0tA-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.8301e+001.7751e+00 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1jnyA/T0214-1jnyA-t04-local-adpstyle1.a2m 1.0401e+001.7808e+00 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/T0214-1jnyA-t04-local-adpstyle5.a2m 1.0401e+001.7808e+00 b.43.3.1
b.44.1.1
c.37.1.8
1uheA/T0214-1uheA-t2k-local-str2-1.5-adpstyle5.a2m 7.7939e+001.8191e+00
1jnyA/1jnyA-T0214-t04-local-adpstyle1.a2m 1.0401e+001.8644e+00 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/1jnyA-T0214-t04-local-adpstyle5.a2m 1.0401e+001.8644e+00 b.43.3.1
b.44.1.1
c.37.1.8
1e0tA/T0214-1e0tA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.8301e+001.9123e+00 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1uheA/T0214-1uheA-t2k-global-str2-1.5-adpstyle5.a2m 7.7939e+001.9581e+00
1fjgD/1c05A-T0214-fssp-global-adpstyle5.a2m 4.4342e+002.0497e+00 1c05A d.66.1.2
1p9kA/T0214-1p9kA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.2582e+002.0701e+00 unknown_sccs
1f60A/T0214-1f60A-t2k-global-str2-1.5-adpstyle5.a2m 3.8034e+002.1229e+00 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1e0tA/1a49A-T0214-fssp-local-adpstyle5.a2m 4.8301e+002.1670e+00 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1fjgD/T0214-1fjgD-t2k-global-str2-1.5-adpstyle5.a2m 4.4342e+002.1723e+00 1c05A d.66.1.2
1e0tA/1a49A-T0214-fssp-global-adpstyle5.a2m 4.8301e+002.1905e+00 1a49A b.58.1.1
c.49.1.1
c.1.12.1
1o5uA/1o5uA-T0214-t2k-local-adpstyle5.a2m 1.0685e+002.1909e+00 b.82.1.8
1o5uA/1o5uA-T0214-t2k-local-adpstyle1.a2m 1.0685e+002.1909e+00 b.82.1.8
1liuA/T0214-1liuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.8328e+002.2337e+00 b.58.1.1
c.49.1.1
c.1.12.1
1o5uA/T0214-1o5uA-simplesw-adpstyle1.a2m 1.0685e+002.3470e+00 b.82.1.8
1o5uA/T0214-1o5uA-simplesw-adpstyle5.a2m 1.0685e+002.3470e+00 b.82.1.8
1jnyA/1jnyA-T0214-t04-global-adpstyle1.a2m 1.0401e+002.3629e+00 b.43.3.1
b.44.1.1
c.37.1.8
1jnyA/1jnyA-T0214-t04-global-adpstyle5.a2m 1.0401e+002.3629e+00 b.43.3.1
b.44.1.1
c.37.1.8
1o5uA/T0214-1o5uA-t04-local-adpstyle5.a2m 1.0685e+002.3815e+00 b.82.1.8
1o5uA/T0214-1o5uA-t04-local-adpstyle1.a2m 1.0685e+002.3815e+00 b.82.1.8
1p9kA/T0214-1p9kA-t04-local-str2-1.5-adpstyle5.a2m 2.2582e+002.3933e+00 unknown_sccs
1fjgD/T0214-1fjgD-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 4.4342e+002.4958e+00 1c05A d.66.1.2
1p9kA/1p9kA-T0214-t2k-local-adpstyle5.a2m 2.2582e+002.4972e+00 unknown_sccs
1p9kA/1p9kA-T0214-t2k-local-adpstyle1.a2m 2.2582e+002.4972e+00 unknown_sccs
1liuA/T0214-1liuA-t2k-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 5.8328e+002.5141e+00 b.58.1.1
c.49.1.1
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c.49.1.1
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c.49.1.1
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c.1.12.1
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c.37.1.8
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b.44.1.1
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b.44.1.1
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c.49.1.1
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c.49.1.1
c.1.12.1
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c.49.1.1
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1liuA/1liuA-T0214-t2k-local-adpstyle5.a2m 5.8328e+008.0630e+00 b.58.1.1
c.49.1.1
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c.49.1.1
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c.49.1.1
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b.44.1.1
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b.44.1.1
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c.49.1.1
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c.49.1.1
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b.44.1.1
c.37.1.8
1f60A/T0214-1f60A-t2k-local-adpstyle5.a2m 3.8034e+001.0527e+01 1efcA b.43.3.1
b.44.1.1
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c.49.1.1
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c.49.1.1
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c.49.1.1
c.1.12.1
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c.49.1.1
c.1.12.1
1f60A/T0214-1f60A-t04-global-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 3.8034e+001.4130e+01 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1f60A/T0214-1f60A-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 3.8034e+001.4130e+01 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1liuA/T0214-1liuA-t04-global-adpstyle5.a2m 5.8328e+001.4626e+01 b.58.1.1
c.49.1.1
c.1.12.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001