Best Alignments for T0212

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1rynA/T0212-1rynA-t2k-global-adpstyle5.a2m 1rynA/T0212-1rynA-t2k-global-adpstyle5.al 9.5853e+006.5767e+00
1rymA/T0212-1rymA-t2k-global-adpstyle1.a2m 1rymA/T0212-1rymA-t2k-global-adpstyle1.al 1.0833e+014.7675e+00
1dsl/1amm-T0212-fssp-local-adpstyle5.a2m 1dsl/1amm-T0212-fssp-local-adpstyle5.al 1.5329e+015.7800e+00 1amm b.11.1.1
1gvmA/T0212-1gvmA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gvmA/T0212-1gvmA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.8129e+015.5297e+00 b.109.1.1
1o91A/T0212-1o91A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1o91A/T0212-1o91A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.8201e+012.5572e+00
22gsA/1pgtA-T0212-fssp-local-adpstyle5.a2m 22gsA/1pgtA-T0212-fssp-local-adpstyle5.al 1.9872e+016.5559e+00 1pgtA a.45.1.1
c.47.1.5
1vcbC/T0212-1vcbC-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1vcbC/T0212-1vcbC-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.1890e+013.2893e+00 1vcbC b.3.3.1
2ljrA/1ljrA-T0212-fssp-local-adpstyle5.a2m 2ljrA/1ljrA-T0212-fssp-local-adpstyle5.al 2.6328e+018.8496e+00 1ljrA a.45.1.1
c.47.1.5
17gsA/1pgtA-T0212-fssp-local-adpstyle5.a2m 17gsA/1pgtA-T0212-fssp-local-adpstyle5.al 2.7014e+018.4676e+00 1pgtA a.45.1.1
c.47.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001