Best Alignments for T0212

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vcbC/T0212-1vcbC-t2k-global-str2-1.5-adpstyle5.a2m 2.1890e+014.4572e-02 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t04-global-str2-1.5-adpstyle5.a2m 2.1890e+015.6526e-02 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t04-local-str2-1.5-adpstyle5.a2m 2.1890e+017.7072e-02 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t2k-local-str2-1.5-adpstyle5.a2m 2.1890e+018.1452e-02 1vcbC b.3.3.1
1o91A/T0212-1o91A-t2k-local-str2-1.5-adpstyle5.a2m 1.8201e+012.8652e-01
1o91A/T0212-1o91A-t2k-global-str2-1.5-adpstyle5.a2m 1.8201e+015.0527e-01
1o91A/T0212-1o91A-t04-global-str2-1.5-adpstyle5.a2m 1.8201e+011.2389e+00
1o91A/T0212-1o91A-t04-local-str2-1.5-adpstyle5.a2m 1.8201e+011.7463e+00
1o91A/T0212-1o91A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.8201e+012.5572e+00
1gvmA/T0212-1gvmA-t04-global-str2-1.5-adpstyle5.a2m 1.8129e+013.2600e+00 b.109.1.1
1vcbC/T0212-1vcbC-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.1890e+013.2893e+00 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 2.1890e+014.6020e+00 1vcbC b.3.3.1
1rymA/T0212-1rymA-t2k-global-adpstyle1.a2m 1.0833e+014.7675e+00
1rymA/T0212-1rymA-t2k-global-adpstyle5.a2m 1.0833e+014.7675e+00
1gvmA/T0212-1gvmA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.8129e+015.5297e+00 b.109.1.1
1rymA/T0212-1rymA-t04-global-adpstyle1.a2m 1.0833e+015.5458e+00
1rymA/T0212-1rymA-t04-global-adpstyle5.a2m 1.0833e+015.5458e+00
1gvmA/T0212-1gvmA-t04-local-str2-1.5-adpstyle5.a2m 1.8129e+015.7523e+00 b.109.1.1
1dsl/1amm-T0212-fssp-local-adpstyle5.a2m 1.5329e+015.7800e+00 1amm b.11.1.1
1dsl/1amm-T0212-fssp-global-adpstyle5.a2m 1.5329e+016.0754e+00 1amm b.11.1.1
1gamA/1amm-T0212-fssp-local-adpstyle5.a2m 1.7445e+016.4376e+00 1amm b.11.1.1
1o91A/T0212-1o91A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.8201e+016.4486e+00
22gsA/1pgtA-T0212-fssp-global-adpstyle5.a2m 1.9872e+016.5079e+00 1pgtA a.45.1.1
c.47.1.5
22gsA/1pgtA-T0212-fssp-local-adpstyle5.a2m 1.9872e+016.5559e+00 1pgtA a.45.1.1
c.47.1.5
1rynA/T0212-1rynA-t2k-global-adpstyle5.a2m 9.5853e+006.5767e+00
1rynA/T0212-1rynA-t2k-global-adpstyle1.a2m 9.5853e+006.5767e+00
1gamA/1amm-T0212-fssp-global-adpstyle5.a2m 1.7445e+016.7667e+00 1amm b.11.1.1
1dsl/T0212-1dsl-t2k-global-adpstyle5.a2m 1.5329e+016.8680e+00 1amm b.11.1.1
1dsl/T0212-1dsl-t2k-global-adpstyle1.a2m 1.5329e+016.8680e+00 1amm b.11.1.1
1vcbC/1vcbC-T0212-fssp-local-adpstyle5.a2m 2.1890e+016.9051e+00 1vcbC b.3.3.1
1vcbC/1vcbC-T0212-fssp-global-adpstyle5.a2m 2.1890e+018.0033e+00 1vcbC b.3.3.1
1gvmA/T0212-1gvmA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1.8129e+018.3413e+00 b.109.1.1
17gsA/1pgtA-T0212-fssp-global-adpstyle5.a2m 2.7014e+018.4055e+00 1pgtA a.45.1.1
c.47.1.5
17gsA/1pgtA-T0212-fssp-local-adpstyle5.a2m 2.7014e+018.4676e+00 1pgtA a.45.1.1
c.47.1.5
1gamA/T0212-1gamA-t2k-global-adpstyle1.a2m 1.7445e+018.6651e+00 1amm b.11.1.1
1gamA/T0212-1gamA-t2k-global-adpstyle5.a2m 1.7445e+018.6651e+00 1amm b.11.1.1
2ljrA/1ljrA-T0212-fssp-local-adpstyle5.a2m 2.6328e+018.8496e+00 1ljrA a.45.1.1
c.47.1.5
1dsl/T0212-1dsl-t04-global-adpstyle1.a2m 1.5329e+018.9859e+00 1amm b.11.1.1
1dsl/T0212-1dsl-t04-global-adpstyle5.a2m 1.5329e+018.9859e+00 1amm b.11.1.1
2ljrA/1ljrA-T0212-fssp-global-adpstyle5.a2m 2.6328e+019.2193e+00 1ljrA a.45.1.1
c.47.1.5
1rynA/T0212-1rynA-t2k-local-adpstyle1.a2m 9.5853e+009.7009e+00
1rynA/T0212-1rynA-t2k-local-adpstyle5.a2m 9.5853e+009.7009e+00
1rynA/T0212-1rynA-t04-local-adpstyle5.a2m 9.5853e+001.0835e+01
1rynA/T0212-1rynA-t04-local-adpstyle1.a2m 9.5853e+001.0835e+01
1rymA/T0212-1rymA-t2k-local-adpstyle1.a2m 1.0833e+011.1109e+01
1rymA/T0212-1rymA-t2k-local-adpstyle5.a2m 1.0833e+011.1109e+01
1rynA/T0212-1rynA-t04-global-adpstyle1.a2m 9.5853e+001.1162e+01
1rynA/T0212-1rynA-t04-global-adpstyle5.a2m 9.5853e+001.1162e+01
1gamA/T0212-1gamA-t04-global-adpstyle1.a2m 1.7445e+011.1751e+01 1amm b.11.1.1
1gamA/T0212-1gamA-t04-global-adpstyle5.a2m 1.7445e+011.1751e+01 1amm b.11.1.1
1rymA/T0212-1rymA-t04-local-adpstyle1.a2m 1.0833e+011.2535e+01
1rymA/T0212-1rymA-t04-local-adpstyle5.a2m 1.0833e+011.2535e+01
1gvmA/1gvmA-T0212-t2k-global-adpstyle1.a2m 1.8129e+011.3191e+01 b.109.1.1
1gvmA/1gvmA-T0212-t2k-global-adpstyle5.a2m 1.8129e+011.3191e+01 b.109.1.1
2ljrA/T0212-2ljrA-t2k-global-adpstyle5.a2m 2.6328e+011.3483e+01 1ljrA a.45.1.1
c.47.1.5
2ljrA/T0212-2ljrA-t2k-global-adpstyle1.a2m 2.6328e+011.3483e+01 1ljrA a.45.1.1
c.47.1.5
1gvmA/T0212-1gvmA-t2k-local-str2-1.5-adpstyle5.a2m 1.8129e+011.4039e+01 b.109.1.1
2ljrA/T0212-2ljrA-t04-global-adpstyle5.a2m 2.6328e+011.4996e+01 1ljrA a.45.1.1
c.47.1.5
2ljrA/T0212-2ljrA-t04-global-adpstyle1.a2m 2.6328e+011.4996e+01 1ljrA a.45.1.1
c.47.1.5
1dsl/T0212-1dsl-t04-local-adpstyle1.a2m 1.5329e+011.5943e+01 1amm b.11.1.1
1dsl/T0212-1dsl-t04-local-adpstyle5.a2m 1.5329e+011.5943e+01 1amm b.11.1.1
1dsl/T0212-1dsl-t2k-local-adpstyle5.a2m 1.5329e+011.6293e+01 1amm b.11.1.1
1dsl/T0212-1dsl-t2k-local-adpstyle1.a2m 1.5329e+011.6293e+01 1amm b.11.1.1
1gvmA/T0212-1gvmA-t04-global-adpstyle1.a2m 1.8129e+011.7546e+01 b.109.1.1
1gvmA/T0212-1gvmA-t04-global-adpstyle5.a2m 1.8129e+011.7546e+01 b.109.1.1
1gvmA/T0212-1gvmA-t2k-global-adpstyle5.a2m 1.8129e+011.7643e+01 b.109.1.1
1gvmA/T0212-1gvmA-t2k-global-adpstyle1.a2m 1.8129e+011.7643e+01 b.109.1.1
1gamA/T0212-1gamA-t04-local-adpstyle1.a2m 1.7445e+011.8461e+01 1amm b.11.1.1
1gamA/T0212-1gamA-t04-local-adpstyle5.a2m 1.7445e+011.8461e+01 1amm b.11.1.1
1gamA/T0212-1gamA-t2k-local-adpstyle1.a2m 1.7445e+011.8774e+01 1amm b.11.1.1
1gamA/T0212-1gamA-t2k-local-adpstyle5.a2m 1.7445e+011.8774e+01 1amm b.11.1.1
22gsA/T0212-22gsA-t04-local-adpstyle1.a2m 1.9872e+012.1625e+01 1pgtA a.45.1.1
c.47.1.5
22gsA/T0212-22gsA-t04-local-adpstyle5.a2m 1.9872e+012.1625e+01 1pgtA a.45.1.1
c.47.1.5
22gsA/T0212-22gsA-t2k-local-adpstyle5.a2m 1.9872e+012.1647e+01 1pgtA a.45.1.1
c.47.1.5
22gsA/T0212-22gsA-t2k-local-adpstyle1.a2m 1.9872e+012.1647e+01 1pgtA a.45.1.1
c.47.1.5
22gsA/T0212-22gsA-t2k-global-adpstyle5.a2m 1.9872e+012.1890e+01 1pgtA a.45.1.1
c.47.1.5
22gsA/T0212-22gsA-t2k-global-adpstyle1.a2m 1.9872e+012.1890e+01 1pgtA a.45.1.1
c.47.1.5
1rynA/T0212-1rynA-simplesw-adpstyle1.a2m 9.5853e+002.3478e+01
1rynA/T0212-1rynA-simplesw-adpstyle5.a2m 9.5853e+002.3478e+01
2ljrA/T0212-2ljrA-t04-local-adpstyle5.a2m 2.6328e+012.4978e+01 1ljrA a.45.1.1
c.47.1.5
2ljrA/T0212-2ljrA-t04-local-adpstyle1.a2m 2.6328e+012.4978e+01 1ljrA a.45.1.1
c.47.1.5
1rymA/T0212-1rymA-simplesw-adpstyle5.a2m 1.0833e+012.5400e+01
1rymA/T0212-1rymA-simplesw-adpstyle1.a2m 1.0833e+012.5400e+01
22gsA/T0212-22gsA-t04-global-adpstyle1.a2m 1.9872e+012.6703e+01 1pgtA a.45.1.1
c.47.1.5
22gsA/T0212-22gsA-t04-global-adpstyle5.a2m 1.9872e+012.6703e+01 1pgtA a.45.1.1
c.47.1.5
1gvmA/1gvmA-T0212-t2k-local-adpstyle1.a2m 1.8129e+012.7138e+01 b.109.1.1
1gvmA/1gvmA-T0212-t2k-local-adpstyle5.a2m 1.8129e+012.7138e+01 b.109.1.1
2ljrA/T0212-2ljrA-t2k-local-adpstyle1.a2m 2.6328e+012.9414e+01 1ljrA a.45.1.1
c.47.1.5
2ljrA/T0212-2ljrA-t2k-local-adpstyle5.a2m 2.6328e+012.9414e+01 1ljrA a.45.1.1
c.47.1.5
17gsA/T0212-17gsA-t2k-global-adpstyle5.a2m 2.7014e+012.9863e+01 1pgtA a.45.1.1
c.47.1.5
17gsA/T0212-17gsA-t2k-global-adpstyle1.a2m 2.7014e+012.9863e+01 1pgtA a.45.1.1
c.47.1.5
17gsA/T0212-17gsA-t04-local-adpstyle1.a2m 2.7014e+013.0225e+01 1pgtA a.45.1.1
c.47.1.5
17gsA/T0212-17gsA-t04-local-adpstyle5.a2m 2.7014e+013.0225e+01 1pgtA a.45.1.1
c.47.1.5
17gsA/T0212-17gsA-t2k-local-adpstyle5.a2m 2.7014e+013.0244e+01 1pgtA a.45.1.1
c.47.1.5
17gsA/T0212-17gsA-t2k-local-adpstyle1.a2m 2.7014e+013.0244e+01 1pgtA a.45.1.1
c.47.1.5
1o91A/T0212-1o91A-t2k-local-adpstyle1.a2m 1.8201e+013.2389e+01
1o91A/T0212-1o91A-t2k-local-adpstyle5.a2m 1.8201e+013.2389e+01
1o91A/1o91A-T0212-t04-local-adpstyle1.a2m 1.8201e+013.4347e+01
1o91A/1o91A-T0212-t04-local-adpstyle5.a2m 1.8201e+013.4347e+01
1gvmA/T0212-1gvmA-t04-local-adpstyle1.a2m 1.8129e+013.5180e+01 b.109.1.1
1gvmA/T0212-1gvmA-t04-local-adpstyle5.a2m 1.8129e+013.5180e+01 b.109.1.1
1gvmA/T0212-1gvmA-t2k-local-adpstyle1.a2m 1.8129e+013.5371e+01 b.109.1.1
1gvmA/T0212-1gvmA-t2k-local-adpstyle5.a2m 1.8129e+013.5371e+01 b.109.1.1
1o91A/T0212-1o91A-t04-local-adpstyle1.a2m 1.8201e+013.5605e+01
1o91A/T0212-1o91A-t04-local-adpstyle5.a2m 1.8201e+013.5605e+01
17gsA/T0212-17gsA-t04-global-adpstyle1.a2m 2.7014e+013.5827e+01 1pgtA a.45.1.1
c.47.1.5
17gsA/T0212-17gsA-t04-global-adpstyle5.a2m 2.7014e+013.5827e+01 1pgtA a.45.1.1
c.47.1.5
1vcbC/1vcbC-T0212-t2k-global-adpstyle5.a2m 2.1890e+013.6872e+01 1vcbC b.3.3.1
1vcbC/1vcbC-T0212-t2k-global-adpstyle1.a2m 2.1890e+013.6872e+01 1vcbC b.3.3.1
22gsA/T0212-22gsA-simplesw-adpstyle1.a2m 1.9872e+013.8433e+01 1pgtA a.45.1.1
c.47.1.5
22gsA/T0212-22gsA-simplesw-adpstyle5.a2m 1.9872e+013.8433e+01 1pgtA a.45.1.1
c.47.1.5
1vcbC/1vcbC-T0212-t2k-local-adpstyle5.a2m 2.1890e+013.9984e+01 1vcbC b.3.3.1
1vcbC/1vcbC-T0212-t2k-local-adpstyle1.a2m 2.1890e+013.9984e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t2k-local-adpstyle1.a2m 2.1890e+014.0033e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t2k-local-adpstyle5.a2m 2.1890e+014.0033e+01 1vcbC b.3.3.1
1dsl/T0212-1dsl-simplesw-adpstyle1.a2m 1.5329e+014.0258e+01 1amm b.11.1.1
1dsl/T0212-1dsl-simplesw-adpstyle5.a2m 1.5329e+014.0258e+01 1amm b.11.1.1
1o91A/1o91A-T0212-t2k-local-adpstyle1.a2m 1.8201e+014.0285e+01
1o91A/1o91A-T0212-t2k-local-adpstyle5.a2m 1.8201e+014.0285e+01
1vcbC/T0212-1vcbC-t04-local-adpstyle5.a2m 2.1890e+014.1922e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t04-local-adpstyle1.a2m 2.1890e+014.1922e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-simplesw-adpstyle1.a2m 2.1890e+014.2177e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-simplesw-adpstyle5.a2m 2.1890e+014.2177e+01 1vcbC b.3.3.1
1o91A/1o91A-T0212-t04-global-adpstyle1.a2m 1.8201e+014.3035e+01
1o91A/1o91A-T0212-t04-global-adpstyle5.a2m 1.8201e+014.3035e+01
1o91A/T0212-1o91A-simplesw-adpstyle1.a2m 1.8201e+014.3124e+01
1o91A/T0212-1o91A-simplesw-adpstyle5.a2m 1.8201e+014.3124e+01
1gvmA/T0212-1gvmA-t2k-global-str2-1.5-adpstyle5.a2m 1.8129e+014.3969e+01 b.109.1.1
1o91A/1o91A-T0212-t2k-global-adpstyle1.a2m 1.8201e+014.4135e+01
1o91A/1o91A-T0212-t2k-global-adpstyle5.a2m 1.8201e+014.4135e+01
1gamA/T0212-1gamA-simplesw-adpstyle1.a2m 1.7445e+014.4319e+01 1amm b.11.1.1
1gamA/T0212-1gamA-simplesw-adpstyle5.a2m 1.7445e+014.4319e+01 1amm b.11.1.1
1o91A/T0212-1o91A-t2k-global-adpstyle1.a2m 1.8201e+014.5272e+01
1o91A/T0212-1o91A-t2k-global-adpstyle5.a2m 1.8201e+014.5272e+01
1gvmA/T0212-1gvmA-simplesw-adpstyle1.a2m 1.8129e+014.5532e+01 b.109.1.1
1gvmA/T0212-1gvmA-simplesw-adpstyle5.a2m 1.8129e+014.5532e+01 b.109.1.1
1vcbC/1vcbC-T0212-t04-local-adpstyle5.a2m 2.1890e+014.9106e+01 1vcbC b.3.3.1
1vcbC/1vcbC-T0212-t04-local-adpstyle1.a2m 2.1890e+014.9106e+01 1vcbC b.3.3.1
1o91A/T0212-1o91A-t04-global-adpstyle1.a2m 1.8201e+015.0145e+01
1o91A/T0212-1o91A-t04-global-adpstyle5.a2m 1.8201e+015.0145e+01
17gsA/T0212-17gsA-simplesw-adpstyle1.a2m 2.7014e+015.2284e+01 1pgtA a.45.1.1
c.47.1.5
17gsA/T0212-17gsA-simplesw-adpstyle5.a2m 2.7014e+015.2284e+01 1pgtA a.45.1.1
c.47.1.5
2ljrA/T0212-2ljrA-simplesw-adpstyle5.a2m 2.6328e+015.3954e+01 1ljrA a.45.1.1
c.47.1.5
2ljrA/T0212-2ljrA-simplesw-adpstyle1.a2m 2.6328e+015.3954e+01 1ljrA a.45.1.1
c.47.1.5
1vcbC/1vcbC-T0212-t04-global-adpstyle5.a2m 2.1890e+015.4666e+01 1vcbC b.3.3.1
1vcbC/1vcbC-T0212-t04-global-adpstyle1.a2m 2.1890e+015.4666e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t2k-global-adpstyle1.a2m 2.1890e+015.6187e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t2k-global-adpstyle5.a2m 2.1890e+015.6187e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t04-global-adpstyle5.a2m 2.1890e+015.7174e+01 1vcbC b.3.3.1
1vcbC/T0212-1vcbC-t04-global-adpstyle1.a2m 2.1890e+015.7174e+01 1vcbC b.3.3.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001