# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1lqtA	456	3.48e-01		c.3.1.1	74198
				c.4.1.1	74199
1h6hA	143	3.88e-01		d.189.1.1	65681
1grj	158	2.03e+00	1grj	a.2.1.1	15691
				d.26.1.2	38433
1pgtA	210	3.38e+00	1pgtA	a.45.1.1	17515
				c.47.1.5	32809
1axdA	209	4.74e+00	1gnwA	a.45.1.1	17730
				c.47.1.5	33024
1qjtA	99	8.21e+00	1eh2	a.39.1.6	17335
1fi2A	201	1.16e+01	1fi2A	b.82.1.2	59845
3ullA	132	1.16e+01	3ullA	b.40.4.3	25282
1inlA	296	1.16e+01		c.66.1.17	66220
1vhoA	346	1.21e+01			
1r9gA	216	1.32e+01			
1o7kA	131	1.49e+01		d.189.1.1	81144
1k92A	455	1.52e+01		c.26.2.1	68325
				d.210.1.1	68326
1lmiA	131	1.56e+01		b.1.19.1	78098
1ezvF	125	1.57e+01	1be3F	f.27.1.1	59550
1n7vA	555	1.58e+01		b.126.1.1	85377
1o91A	178	1.63e+01			
1j9lA	247	1.70e+01		c.106.1.1	62762
1psuA	140	1.71e+01		d.38.1.5	88285
1kb9G	125	1.74e+01		f.27.1.1	77322
1f5fA	205	1.81e+01	1d2sA	b.29.1.4	24222
1k3eA	156	1.89e+01		d.198.1.1	68103
1kexA	155	1.94e+01		b.18.1.2	77350
1qb5D	99	1.99e+01		b.40.2.1	88357
1wkt	88	2.05e+01	1wkt	b.11.1.2	23630
1f6fB	210	2.10e+01	1axiB	b.1.2.1	22033
				b.1.2.1	22034
1mjuL	219	2.17e+01			
1qz8A	113	2.21e+01			
1gy8A	397	2.21e+01		c.2.1.2	83376
1ngmB	72	2.38e+01		j.104.1.1	85687
1tiiD	99	2.43e+01	1tiiD	b.40.2.1	24965
1kq6A	141	2.45e+01			
1p97A	114	2.84e+01			
1f42A	306	2.96e+01	1f42A	b.1.1.4	59636
				b.1.2.1	59637
				b.1.2.1	59638
1l8dA	112	3.06e+01		h.4.12.1	73687
1shdA	107	3.36e+01	1fmk	d.93.1.1	40440
1o7sA	127	3.37e+01		b.1.1.1	86644
1d2sA	170	3.54e+01	1d2sA	b.29.1.4	24221
1j5wA	298	3.77e+01		d.104.1.1	71589
1eljA	381	3.80e+01	4mbp	c.94.1.1	35791
1f3z	161	3.94e+01	1gpr	b.84.3.1	28273
1pz4A	116	3.98e+01