Citations (SAM, SAM-T99, HMMs)
10 20 30 40 50
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1 .....MRKIDLC..LS.SEG.S.E.VILATSSDEKHPPENIIDGNPETFWTTTGMFPQEFIICFH
2 .....-------..-R.EIG.S.QaVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFR
3 .....-------..-R.EIG.S.QaVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFR
4 .....-------..-R.EIG.S.QaVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFR
5 .....-------..-R.EIG.S.QaVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFR
6 ny...KLIIDDD..LR.EMGkN.A.AWSVSSCKPGNGVTTLRDDNLETYWQSDGLQPHLINIQFQ
7 ny...KLIIDDD..LR.EMGkN.A.AWSVSSCKPGNGVTTLRDDNLETYWQSDGLQPHLINIQFQ
8 .....-------..-R.EIG.S.QaVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFR
9 .....-------..-R.EIG.S.QaVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFR
10 edp..LAEERLG..FVrEVG.A.QaVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVNIQFH
11 idp..IQKELAG..RVrEVG.NhA.IWSLSSCKPGFGVDQLRDDITETYWQSDGQLPHLVNIQFK
12 .....MRKVDLC..SV.TEG.T.E.VILATSSDEKHPPENIIDGNPETFWTTTGMFPQEFIICFH
13 pel..MVDDDMR..EM.AK-.T.A.AWSVSSCKPGNGVASLRDDNLDTYWQSDGAQPHLVNIQFQ
14 .....-------..--.EVG.G.QaVWSLSSCKPGFGVDQLRDNSMETYWQSDGQLPHLVNIQFH
15 .....MRKVDLC..SV.TEG.T.E.VILATSSDEKHPPENIIDGNPETFWTTTGMFPQEFIICFH
16 .....MRKIDLC..LS.SEG.S.E.VILATSSDEKHPPENIIDGNPETFWTTTGMFPQEFIICFH
17 .....-------..--.--H.L.A.LWKPSSFKLGNPVDFALDDNYDTFWQSDGGQPHQLDIMFS
18 .....-------..--.--H.L.A.LWKPSSFKLGNPVDFALDDNYDTFWQSDGGQPHQLDIMFS
19 .....-------..--.--H.L.A.LWKPSSFKLGNPVDFALDDNYDTFWQSDGGQPHQLDIMFS
20 .....-------..--.--H.L.A.LWKPSSFKLGNPVDFALDDNYDTFWQSDGGQPHQLDIMFS
21 pkn..VEPRDSP..LL.DIS.N.QaIWTVSSCKNGYGIDELMSDNVEKYWQSDGPQPHTIHLEFQ
22 .....-------..--.---.L.A.YWKPSSFKAGYPIENALDDNPATFWQSDGSQPHTIDVFFS
23 .....-------..--.---.-.-.HFSVSSHKPGNGVAELLSDDLDKYWQSDGQQPHLLTMHFL
24 lk7seTQKSTEG..FV.DIG.NlA.QWTCSSEKSGFPIRLVRDDNIDTYWQSDGSQPHTIHIKFV
25 .....-------..--.---.L.A.RFTVSSHKPGNGVEELKSDDLKQFWQSDGPQPHKLTMYFT
26 thr..LPKIRLSkkYV.ELG.ClG.VWKLSSFKNKFNVKNLRDIDPNTYWQTDSLAPHTITIQFI
27 .....MA--NSS..LG.SLG.A.K.VVVISSSDENHPPENIIDGTTQTFWMSTGLFPQEFIIRFT
28 .....MRKIDLC..LS.SEG.S.E.VILATSSDEKHPPENIIDGNPETFWTTTGMFPQEFIICFH
29 .....-------..--.---.M.E.-IRLSSFKREHSLRELLSKDMSEYWATDDVLPHSIQISFD
30 knn..LPKIKISkkYV.EVG.ClG.IWKLSSSKNKYDIKKLKDNDANTYWQSSSIGPHTITIQFL
31 .....MRKVDLC..SV.TEG.T.E.VILATSSDEKHPPENIIDGPA---W--RGRRGKSYSQTFH
60 70 80 90 100
| | | | |
1 .KHVRIERLVI.....QSYFVQTLKIEKSTSKEPVDF..EQWIE..KDLVHTEGQ..LQ..NE..
2 .RKTTVKTLCIya7sdESYTPSKISVRVGNNFHNLQE..IRQLE..--LVEPSGW..IH..VPlt
3 .RKTTVKTLCIya7sdESYTPSKISVRVGNNFHNLQE..IRQLE..--LVEPSGW..IH..VPlt
4 .RKTTVKTLCIya7sdESYTPSKISVRVGNNFHNLQE..IRQLE..--LVEPSGW..IH..VPlt
5 .RKTTVKTLCIya7sdESYTPSKISVRVGNNFHNLQE..IRQLE..--LVEPSGW..IH..VPlt
6 .KKVKLQLVVLyv7ldESYTPSKISIRAGDGFHNLKE..IKSVE..--LVKPTGW..VC..LSls
7 .KKVKLQLVVLyv7ldESYTPSKISIRAGDGFHNLKD..IKSVE..--LVKPTGW..VC..LSls
8 .RRTTVKMLCIya7sdESYTPSKISVRVGNNFHNLQE..IRQLE..--MVEPSGW..IH..ISlm
9 .RKTTVKTLCIya7sdESYTPSKISVRVGNNFHNLQE..IRQLE..--LVEPSGW..IH..VPlt
10 .KRTNISQIYIyt7ldESYTPSRISIRSGTNFNDLQE..LQVMD..--LTEPTGW..VQ..IPik
11 .RKTTICDICIyt7ldESYTPSRISIRAGTNFNDLQE..IEVMD..--LNEPSGWviIP..IK..
12 .KHVKIEKLVI.....QSYLVRTLRIEKTTSKEPLDF..EQWVE..KDLVHTEGQ..LQ..NE..
13 .KKVQLQLVVVyv7ldESYTPSKISVRAGDGFHNLKE..IKTVE..--LSKPVGW..VH..ISls
14 .RKTTVSQIYIys7ldESYTPSRISIRCGTHFNDLQE..VEVVD..--LCEPSGW..VC..IPi.
15 .KHVKIEKLVI.....QSYLVRTLRTEKTTSKEPLDF..EQWVE..KDLVHTEGQ..LQ..NE..
16 .KHVRIERLVI.....QSYFVQTLKIEKSTSKEPVDF..EQWIE..KDLVHTEGQ..LQ..NE..
17 .KRMDICVMAIff7adESYAPSLVKVYAGHSPSDARF..YKMLE..--VRNVNGWvaLR..FL..
18 .KRMDICVMAIff7adESYAPSLVKVYAGHSPSDARF..YKMLE..--VRNVNGWvaLR..FL..
19 .KRMDICVMAIff7adESYAPSLVKVYAGHSPSDARF..YKMLE..--VRNVNGWvaLR..FL..
20 .KRMDICVMAIff7adESYAPSLVKVYAGHSPSDARF..YKMLE..--VRNVNGWvaLR..FL..
21 .KKTDVAFMMFyl7ndESYTPSKIQIKLGSSHQDIFF..RNA--..QSFNEPQGWcaID..IR..
22 .KRVDIIQLAMyf7vdESYTSETLRIYAGHSPSDATY..YKTLE..--VRNVNGW..VKftFE..
23 .RRVEIRAIRFyv7qdESYTPTHILWYAGTGHHDLM-..-QFGE..QGLVDPRGWqeIK..IE..
24 .KRVSIKYVSMyl7ldESYTPSTLRISAGTGFQDLEI..VTTVQ..--VEEPTGW..VH..VPvg
25 .KRVGIRDIRFfv7edESYTPTKVVFKAGTSENNLIE..FATMT..--MENPVGW..QQ..VPia
26 .KFLKISKIYLll7ldESYTPHDITIHIGNDENHLELlcETFCDmnKYSLNEPFWflID..FE..
27 .ESTNVSAVTI.....ESYNVKHLKLEKNTSQSASQF..ESITE..KEFEHVTGC..LQ..SN..
28 .KHVRIERLVI.....QSYFVQTLKIEKTRLKSQLIL..SNGLK..KIWYTQRGS..FK..MK..
29 .RVRYVQSVQLfl7qdDSYTPEKIGVRCGLTREDVRE..ISSVE..--LVEPEGL..LT..LS..
30 .KLTKVSKIFLlf7ldESYTPCEILIKIGNDEHNLEY..LCT--..---------..--..--..
31 sKKSGQWR---.....---------------------..-----..---------..--..--..
110 120 130 140
| | | |
1 ...E.....I....VAHDG..SA.TYLRFIIVSAFDHFASVHSVSAEGTVVSNLS.....S
2 ...D.....N....HKKPT..RT.FMIQIAVLANHQNGRDTHMRQIKIYTPVEESsig..K
3 ...D.....N....HKKPT..RT.FMIQIAVLANHQNGRDTHMRQIKIYTPVEESsig..K
4 ...D.....N....HKKPT..RT.FMIQIAVLANHQNGRDTHMRQIKIYTPVEESsig..K
5 ...D.....N....HKKPT..RT.FMIQIAVLANHQNGRDTHMRQIKIYTPVEESsig..K
6 gt.D.....P....RETFV..NT.FMLQIAILSNHLNGRDTHIRQIKVYGPRPNPip6pf-
7 gt.D.....P....RETFV..NT.FMLQIAILSNHLNGRDTHIRQIKVYGPRPNPip6pf-
8 n..Q.....R....TNEPI..ST.FMIQIAVLANHQNGRDTHMRQIKVYTPVEESsig..K
9 ...D.....N....HKKPT..RS.FMIQIAVLANHLNGRDTHMRQIKIYTPVEESsig..K
10 ...D.....G....NVKSI..RT.FMLQIAVISNHQNGRDTHMRQIRIHAPVEGKhypl.-
11 ...D.....I....NDRPI..RT.FMIQIAVISNHQNGRDTHMRQINVYSPTQDIlgppaS
12 ...E.....I....VARDG..YA.TFLRFIIVSAFDHFASVHSISAEGLTVSSLP.....-
13 ga.D.....P....RETFI..HT.FMLQISVLSNHLNGRDTHIRQIKIYGPRPNHvp6pf-
14 ...K.....E....YEEML..MCtFMIQIAVISNHQNGRDTHMRQIRIHSPTEGSqypl.-
15 ...E.....I....VARDG..YA.TFLRFIIVSAFDHFASVHSISAEGLTVSSLP.....-
16 ...E.....I....VAHDG..SA.TYLRFIIVSAFDHFASVHSVSAEGTVVSNLS.....S
17 ...D.....N....REDDQllKC.QFIRLLFPVNHENGKDTHLRGIRLYVPSNEPhqdt.-
18 ...D.....N....REDDQllKC.QFIRLLFPVNHENGKDTHLRGIRLYVPSNEPhqdt.-
19 ...D.....N....REDDQllKC.QFIRLLFPVNHENGKDTHLRGIRLYVPSNEPhqdt.-
20 ...D.....N....REDDQllKC.QFIRLLFPVNHENGKDTHLRGIRLYVPSNEPhqdt.-
21 ...D.....K....MERPQ..RV.FWIQIQVIQNHQNGRDTHIRHVRVLGPKRSRvsptnR
22 ...D.....N....RPSDGllKC.QFLRIEVVTNHENGKDTHLRGIRMFGPGESLvnia.D
23 ...G.....CggghDGNSL..CC.FIVQMHVKENHQNGKDTHIRGIKIYALDDNTpra..S
24 ...D.....F....GRNGLl.DV.HLIQIKILANHQSGKDSHVRLIK--------.....-
25 6ggD.....P....DGNTL..VA.WVVQMQILENHQNGKDTHLRGIKIYSFDNDSalg..P
26 ...Kc15hlK....KKNHI..YC.RCLKISIISSQHNGKDTRIRQLQIYGPNYFHyky..D
27 ...T.....V....PLNGI..DA.THLRFIITSGHDHFVSVHRVSVQL-------.....-
28 ...K.....L....WHMMA..PL.LT-----------------------------.....-
29 ...-.....-....VAR--..KC.IYILVVINSNHQEGKDSHVRHLKILESSTKEiyy..K
30 ...-.....-....-----..--.-------------------------------.....-
31 ...-.....-....-----..--.-------------------------------.....-