# CreatePredAlphaCost pred_alpha2k alpha11 T0210.t2k.alpha.rdb 2 alpha alpha_prev sum
# CreatePredAlphaCost pred_alpha04 alpha11 T0210.t04.alpha.rdb 2 alpha alpha_prev sum

SetCost wet6.5 5 near_backbone 3 way_back 3 dry5 7 dry6.5 9 dry8 9 dry12 2 \
	phobic_fit 3 \
	sidechain 6 \
	bystroff 5 \
	soft_clashes 20 backbone_clashes 2 \
	break 50  \
	constraints 4 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 0.4 \
	hbond_geom_beta_pair 1.5

// Add the following for extra-cellular proteins:
#	known_ssbond 0.5	# and put ssbond command in constraints file
#	maybe_ssbond 0.5

# from t04-thin40.mi
Constraint F54.CB V123.CB -10. 7.0 12.0 0.772157
# Constraint L71.CB G120.CA -10. 7.0 12.0 0.596468

# from t04-thin62.mi
Constraint Y64.CB G120.CA -10. 5.0 12.0 0.555221

# from t2k-thin40.mi
Constraint E12.CB E138.CB -10. 7.0 14.0 0.551905
# from t2k-thin62.mi
# Constraint F54.CB S109.CB -10. 7.0 12.0 0.629911
Constraint I73.CB F107.CB -10. 7.0 12.0 0.580143


# Put the helix on the back face

Constraint F7.CE2   V51.CB 1.0 5.0 8.0		1


#from try5-opt2.sheets
# SheetConstraint Y22 S28		R47 S41		hbond S24
Sheetconstraint Y22 Y26		L45 S41		Hbond Y26	1.0 ## back up 2

SheetConstraint S28 T30		I42 S40		hbond E29	2.0
SheetConstraint L38 R47		G126 S117	hbond S40	2.0
SheetConstraint F54 R56		G108 I106	hbond H55	2.0
SheetConstraint F54 L57		L134 D131	hbond R56	2.0
SheetConstraint E61 H66		S124 V119	hbond M62	2.0

# SheetConstraint H66 G68		G120 L118	hbond A67
Sheetconstraint  M62 H66	V101 P97	Hbond W63	1.0	#realign

SheetConstraint Q69 M75		G88 L82		hbond S70	2.0
SheetConstraint S70 M75		M111 I106	hbond L71	2.0