CreatePredAlphaCost pred_alpha2k alpha11 T0210.t2k.alpha.rdb 2 alpha alpha_prev sum
CreatePredAlphaCost pred_alpha04 alpha11 T0210.t04.alpha.rdb 2 alpha alpha_prev sum

SetCost wet6.5 5 near_backbone 3 way_back 3 dry5 7 dry6.5 9 dry8 9 dry12 2 \
	phobic_fit 3 \
	sidechain 6 \
	bystroff 5 \
	soft_clashes 15 backbone_clashes 2 \
	break 40  \
	pred_alpha2k 0.1 \
	pred_alpha04 3.5 \
	constraints 1 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 0.4 \
	hbond_geom_beta_pair 1.5

// Add the following for extra-cellular proteins:
#	known_ssbond 0.5	# and put ssbond command in constraints file
#	maybe_ssbond 0.5

// For comparative modeling, increase weight of break and hbond_geom...

// put any constraints here, such as helix constraints, strand constraints,
//	ssbond, hbond, or just arbitrary pairs of atoms.

# include T0210.t2k.dssp-ebghstl.constraints
# include T0210.t04.str2.constraints

# from t04-thin40.mi
Constraint F54.CB V123.CB -10. 7.0 12.0 0.121489

# from t04-thin50.mi
Constraint L57.CB C121.CB -10. 7.0 12.0 0.106412

# from t2k-thin40.mi
Constraint E12.CB E138.CB -10. 7.0 12.0 0.107671